Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.62□□□□□ -1.67
UBE4BO95155 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
UBE4BO95155 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.62□□□□□ -1.67
UBE4BO95155 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
UBE4BO95155 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.62□□□□□ -1.67
UBE4BO95155 AC131238.1-201ENST00000617135 328 ntBASIC4.62□□□□□ -1.67
UBE4BO95155 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.62□□□□□ -1.67
UBE4BO95155 AC139769.3-201ENST00000618383 175 ntBASIC4.62□□□□□ -1.67
UBE4BO95155 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.62□□□□□ -1.67
UBE4BO95155 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
UBE4BO95155 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
UBE4BO95155 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.62□□□□□ -1.67
UBE4BO95155 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
UBE4BO95155 AC011266.1-201ENST00000624119 3569 ntBASIC4.61□□□□□ -1.67
UBE4BO95155 AL445437.1-201ENST00000623157 3087 ntBASIC4.61□□□□□ -1.67
UBE4BO95155 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
UBE4BO95155 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
UBE4BO95155 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
UBE4BO95155 RNU6-883P-201ENST00000384597 107 ntBASIC4.61□□□□□ -1.67
UBE4BO95155 AL161909.1-201ENST00000397390 712 ntBASIC4.61□□□□□ -1.67
UBE4BO95155 RPS27AP11-201ENST00000402798 447 ntBASIC4.61□□□□□ -1.67
UBE4BO95155 AL121834.1-202ENST00000404494 277 ntBASIC4.61□□□□□ -1.67
UBE4BO95155 MTND3P20-201ENST00000407663 186 ntBASIC4.61□□□□□ -1.67
UBE4BO95155 RPL23AP26-201ENST00000412728 464 ntBASIC4.61□□□□□ -1.67
UBE4BO95155 AC004690.1-201ENST00000418216 328 ntBASIC4.61□□□□□ -1.67
UBE4BO95155 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.61□□□□□ -1.67
UBE4BO95155 EIF2S2P5-201ENST00000457635 968 ntBASIC4.61□□□□□ -1.67
UBE4BO95155 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.61□□□□□ -1.67
UBE4BO95155 RN7SL585P-201ENST00000470538 280 ntBASIC4.61□□□□□ -1.67
UBE4BO95155 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.61□□□□□ -1.67
UBE4BO95155 MTCO1P31-201ENST00000506355 492 ntBASIC4.61□□□□□ -1.67
UBE4BO95155 AC108475.1-201ENST00000507880 950 ntBASIC4.61□□□□□ -1.67
UBE4BO95155 AC017037.1-201ENST00000508460 471 ntBASIC4.61□□□□□ -1.67
UBE4BO95155 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.61□□□□□ -1.67
UBE4BO95155 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.61□□□□□ -1.67
UBE4BO95155 AC099522.1-202ENST00000514718 367 ntBASIC4.61□□□□□ -1.67
UBE4BO95155 HMGB1P23-201ENST00000518743 568 ntBASIC4.61□□□□□ -1.67
UBE4BO95155 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.61□□□□□ -1.67
UBE4BO95155 SMARCE1P4-201ENST00000523647 241 ntBASIC4.61□□□□□ -1.67
UBE4BO95155 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
UBE4BO95155 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.61□□□□□ -1.67
UBE4BO95155 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.61□□□□□ -1.67
UBE4BO95155 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.61□□□□□ -1.67
UBE4BO95155 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.61□□□□□ -1.67
UBE4BO95155 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.61□□□□□ -1.67
UBE4BO95155 AC092653.1-201ENST00000608509 531 ntBASIC4.61□□□□□ -1.67
UBE4BO95155 AL445423.1-201ENST00000609941 536 ntBASIC4.61□□□□□ -1.67
UBE4BO95155 AC016957.2-201ENST00000616998 848 ntBASIC4.61□□□□□ -1.67
UBE4BO95155 AP000843.1-201ENST00000624880 701 ntBASIC4.61□□□□□ -1.67
UBE4BO95155 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.61□□□□□ -1.67
UBE4BO95155 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
UBE4BO95155 LINC01109-201ENST00000603837 3081 ntBASIC4.61□□□□□ -1.67
UBE4BO95155 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.61□□□□□ -1.67
UBE4BO95155 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
UBE4BO95155 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
UBE4BO95155 AC093535.2-201ENST00000624769 2326 ntBASIC4.61□□□□□ -1.67
UBE4BO95155 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
UBE4BO95155 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
UBE4BO95155 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
UBE4BO95155 AC009501.3-201ENST00000605001 1352 ntBASIC4.6□□□□□ -1.67
UBE4BO95155 AC096656.1-201ENST00000623826 1364 ntBASIC4.6□□□□□ -1.67
UBE4BO95155 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
UBE4BO95155 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
UBE4BO95155 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
UBE4BO95155 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
UBE4BO95155 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
UBE4BO95155 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.6□□□□□ -1.67
UBE4BO95155 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
UBE4BO95155 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
UBE4BO95155 MIR383-201ENST00000362257 73 ntBASIC4.6□□□□□ -1.67
UBE4BO95155 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
UBE4BO95155 AC019155.1-201ENST00000382242 574 ntBASIC4.6□□□□□ -1.67
UBE4BO95155 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
UBE4BO95155 RN7SKP182-201ENST00000410772 298 ntBASIC4.6□□□□□ -1.67
UBE4BO95155 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.6□□□□□ -1.67
UBE4BO95155 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.6□□□□□ -1.67
UBE4BO95155 AC009965.2-201ENST00000425328 970 ntBASIC4.6□□□□□ -1.67
UBE4BO95155 YY1P1-201ENST00000427625 668 ntBASIC4.6□□□□□ -1.67
UBE4BO95155 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.6□□□□□ -1.67
UBE4BO95155 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.6□□□□□ -1.67
UBE4BO95155 RPL34P26-201ENST00000445636 354 ntBASIC4.6□□□□□ -1.67
UBE4BO95155 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.6□□□□□ -1.67
UBE4BO95155 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.6□□□□□ -1.67
UBE4BO95155 HMGB1P26-201ENST00000452520 628 ntBASIC4.6□□□□□ -1.67
UBE4BO95155 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.6□□□□□ -1.67
UBE4BO95155 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
UBE4BO95155 AC005229.2-201ENST00000456995 399 ntBASIC4.6□□□□□ -1.67
UBE4BO95155 UQCRHP4-201ENST00000471686 272 ntBASIC4.6□□□□□ -1.67
UBE4BO95155 AC083829.1-201ENST00000503756 657 ntBASIC4.6□□□□□ -1.67
UBE4BO95155 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
UBE4BO95155 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
UBE4BO95155 RN7SKP122-201ENST00000515923 296 ntBASIC4.6□□□□□ -1.67
UBE4BO95155 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.6□□□□□ -1.67
UBE4BO95155 AC138701.1-201ENST00000524329 714 ntBASIC4.6□□□□□ -1.67
UBE4BO95155 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.6□□□□□ -1.67
UBE4BO95155 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.6□□□□□ -1.67
UBE4BO95155 BNIP3P5-201ENST00000562290 498 ntBASIC4.6□□□□□ -1.67
UBE4BO95155 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.6□□□□□ -1.67
UBE4BO95155 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
UBE4BO95155 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms