Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 YWHAZP8-201ENST00000436935 731 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 AC241584.1-201ENST00000438469 1241 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.13□□□□□ -1.59
PHGDHO43175 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.13□□□□□ -1.59
PHGDHO43175 AC092473.1-201ENST00000441098 221 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 RPL7AP61-201ENST00000443410 636 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 CYCSP24-201ENST00000445119 316 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.13□□□□□ -1.59
PHGDHO43175 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.13□□□□□ -1.59
PHGDHO43175 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 RN7SL466P-201ENST00000497546 295 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 AC147055.4-201ENST00000504399 745 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.13□□□□□ -1.59
PHGDHO43175 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.13□□□□□ -1.59
PHGDHO43175 SOD1P3-201ENST00000518682 454 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 SMARCE1P4-201ENST00000523647 241 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.13□□□□□ -1.59
PHGDHO43175 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.13□□□□□ -1.59
PHGDHO43175 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.13□□□□□ -1.59
PHGDHO43175 OR5M2P-201ENST00000529003 936 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.13□□□□□ -1.59
PHGDHO43175 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.13□□□□□ -1.59
PHGDHO43175 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.13□□□□□ -1.59
PHGDHO43175 AC126177.5-201ENST00000549599 178 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.13□□□□□ -1.59
PHGDHO43175 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PHGDHO43175 AC018552.3-201ENST00000567416 561 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.13□□□□□ -1.59
PHGDHO43175 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.13□□□□□ -1.59
PHGDHO43175 AP005262.1-201ENST00000582646 997 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.13□□□□□ -1.59
PHGDHO43175 AL358072.1-201ENST00000604156 575 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 AL451064.1-201ENST00000607718 471 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 AC072039.2-201ENST00000608883 439 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PHGDHO43175 AC122133.1-201ENST00000613964 233 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 AP001005.3-201ENST00000622049 129 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
PHGDHO43175 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.13□□□□□ -1.59
PHGDHO43175 AC000374.1-201ENST00000434698 1745 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PHGDHO43175 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.13□□□□□ -1.59
PHGDHO43175 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.13□□□□□ -1.59
PHGDHO43175 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
PHGDHO43175 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.13□□□□□ -1.59
PHGDHO43175 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.13□□□□□ -1.59
PHGDHO43175 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
PHGDHO43175 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PHGDHO43175 PANDAR-201ENST00000629595 1506 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PHGDHO43175 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
PHGDHO43175 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.12□□□□□ -1.59
PHGDHO43175 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.12□□□□□ -1.59
PHGDHO43175 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PHGDHO43175 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PHGDHO43175 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PHGDHO43175 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PHGDHO43175 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PHGDHO43175 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
PHGDHO43175 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.12□□□□□ -1.59
PHGDHO43175 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.12□□□□□ -1.59
PHGDHO43175 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PHGDHO43175 U3.3-201ENST00000362986 216 ntBASIC5.12□□□□□ -1.59
PHGDHO43175 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PHGDHO43175 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PHGDHO43175 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PHGDHO43175 RPL31P52-201ENST00000407532 367 ntBASIC5.12□□□□□ -1.59
PHGDHO43175 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.12□□□□□ -1.59
PHGDHO43175 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.12□□□□□ -1.59
PHGDHO43175 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.12□□□□□ -1.59
PHGDHO43175 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.12□□□□□ -1.59
PHGDHO43175 IFNNP1-201ENST00000429219 553 ntBASIC5.12□□□□□ -1.59
PHGDHO43175 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.12□□□□□ -1.59
PHGDHO43175 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.12□□□□□ -1.59
PHGDHO43175 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.12□□□□□ -1.59
PHGDHO43175 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.12□□□□□ -1.59
PHGDHO43175 RPS29P10-201ENST00000439197 166 ntBASIC5.12□□□□□ -1.59
PHGDHO43175 RPS11P7-201ENST00000442125 465 ntBASIC5.12□□□□□ -1.59
PHGDHO43175 HMGN3P1-201ENST00000453847 193 ntBASIC5.12□□□□□ -1.59
PHGDHO43175 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.12□□□□□ -1.59
PHGDHO43175 SYPL1P1-201ENST00000473622 768 ntBASIC5.12□□□□□ -1.59
PHGDHO43175 MTND3P7-201ENST00000474435 343 ntBASIC5.12□□□□□ -1.59
PHGDHO43175 RPL30P11-201ENST00000495304 339 ntBASIC5.12□□□□□ -1.59
PHGDHO43175 AC097173.1-201ENST00000505862 819 ntBASIC5.12□□□□□ -1.59
PHGDHO43175 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.12□□□□□ -1.59
PHGDHO43175 RNA5SP228-201ENST00000516232 133 ntBASIC5.12□□□□□ -1.59
PHGDHO43175 AC012400.1-201ENST00000518452 381 ntBASIC5.12□□□□□ -1.59
PHGDHO43175 AC027309.2-201ENST00000520566 192 ntBASIC5.12□□□□□ -1.59
PHGDHO43175 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.12□□□□□ -1.59
PHGDHO43175 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.12□□□□□ -1.59
PHGDHO43175 AC135279.1-201ENST00000543493 504 ntBASIC5.12□□□□□ -1.59
PHGDHO43175 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.12□□□□□ -1.59
PHGDHO43175 EIF5A2P1-201ENST00000564027 460 ntBASIC5.12□□□□□ -1.59
PHGDHO43175 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.12□□□□□ -1.59
PHGDHO43175 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.12□□□□□ -1.59
PHGDHO43175 VN1R90P-201ENST00000595717 726 ntBASIC5.12□□□□□ -1.59
PHGDHO43175 AC015726.1-201ENST00000602353 681 ntBASIC5.12□□□□□ -1.59
PHGDHO43175 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.12□□□□□ -1.59
PHGDHO43175 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms