Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RNU6-202P-201ENST00000515998 96 ntBASIC5.29□□□□□ -1.56
FOXN3O00409 RNA5SP249-201ENST00000516127 99 ntBASIC5.29□□□□□ -1.56
FOXN3O00409 RNA5SP34-201ENST00000516887 130 ntBASIC5.29□□□□□ -1.56
FOXN3O00409 RNA5SP392-201ENST00000516905 112 ntBASIC5.29□□□□□ -1.56
FOXN3O00409 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
FOXN3O00409 AC092490.3-201ENST00000545370 572 ntBASIC5.29□□□□□ -1.56
FOXN3O00409 AC090022.1-201ENST00000546569 311 ntBASIC5.29□□□□□ -1.56
FOXN3O00409 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.29□□□□□ -1.56
FOXN3O00409 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.29□□□□□ -1.56
FOXN3O00409 AC008536.1-201ENST00000602872 669 ntBASIC5.29□□□□□ -1.56
FOXN3O00409 AP000255.1-201ENST00000610276 676 ntBASIC5.29□□□□□ -1.56
FOXN3O00409 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
FOXN3O00409 AC116447.1-201ENST00000613153 453 ntBASIC5.29□□□□□ -1.56
FOXN3O00409 AC107075.1-201ENST00000613695 314 ntBASIC5.29□□□□□ -1.56
FOXN3O00409 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.29□□□□□ -1.56
FOXN3O00409 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.29□□□□□ -1.56
FOXN3O00409 AC009643.2-201ENST00000603543 1448 ntBASIC5.29□□□□□ -1.56
FOXN3O00409 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
FOXN3O00409 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
FOXN3O00409 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
FOXN3O00409 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
FOXN3O00409 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.28□□□□□ -1.56
FOXN3O00409 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
FOXN3O00409 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
FOXN3O00409 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
FOXN3O00409 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.28□□□□□ -1.56
FOXN3O00409 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
FOXN3O00409 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
FOXN3O00409 RNU6-1214P-201ENST00000363650 109 ntBASIC5.28□□□□□ -1.56
FOXN3O00409 SNORD65.1-201ENST00000390889 71 ntBASIC5.28□□□□□ -1.56
FOXN3O00409 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
FOXN3O00409 ATP5F1P2-201ENST00000398143 760 ntBASIC5.28□□□□□ -1.56
FOXN3O00409 AC119751.3-201ENST00000399720 670 ntBASIC5.28□□□□□ -1.56
FOXN3O00409 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.28□□□□□ -1.56
FOXN3O00409 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
FOXN3O00409 AC007435.1-201ENST00000421086 415 ntBASIC5.28□□□□□ -1.56
FOXN3O00409 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
FOXN3O00409 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.28□□□□□ -1.56
FOXN3O00409 OR2AH1P-201ENST00000425717 928 ntBASIC5.28□□□□□ -1.56
FOXN3O00409 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.28□□□□□ -1.56
FOXN3O00409 RPL37P1-201ENST00000432310 284 ntBASIC5.28□□□□□ -1.56
FOXN3O00409 GTF2IP7-202ENST00000436677 309 ntBASIC5.28□□□□□ -1.56
FOXN3O00409 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
FOXN3O00409 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.28□□□□□ -1.56
FOXN3O00409 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.28□□□□□ -1.56
FOXN3O00409 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.28□□□□□ -1.56
FOXN3O00409 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.28□□□□□ -1.56
FOXN3O00409 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.28□□□□□ -1.56
FOXN3O00409 AC108734.3-201ENST00000481241 1165 ntBASIC5.28□□□□□ -1.56
FOXN3O00409 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.28□□□□□ -1.56
FOXN3O00409 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.28□□□□□ -1.56
FOXN3O00409 HMGB3P16-201ENST00000508037 287 ntBASIC5.28□□□□□ -1.56
FOXN3O00409 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.28□□□□□ -1.56
FOXN3O00409 AC093755.1-201ENST00000512950 1023 ntBASIC5.28□□□□□ -1.56
FOXN3O00409 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.28□□□□□ -1.56
FOXN3O00409 AC027308.1-201ENST00000517993 110 ntBASIC5.28□□□□□ -1.56
FOXN3O00409 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.28□□□□□ -1.56
FOXN3O00409 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
FOXN3O00409 MTCYBP27-201ENST00000555160 670 ntBASIC5.28□□□□□ -1.56
FOXN3O00409 AC068446.3-201ENST00000555285 382 ntBASIC5.28□□□□□ -1.56
FOXN3O00409 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.28□□□□□ -1.56
FOXN3O00409 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.28□□□□□ -1.56
FOXN3O00409 AC018552.3-201ENST00000567416 561 ntBASIC5.28□□□□□ -1.56
FOXN3O00409 CYCSP40-201ENST00000575927 294 ntBASIC5.28□□□□□ -1.56
FOXN3O00409 AC022662.1-201ENST00000580252 331 ntBASIC5.28□□□□□ -1.56
FOXN3O00409 MRPS35P3-201ENST00000603189 709 ntBASIC5.28□□□□□ -1.56
FOXN3O00409 MEMO1P5-201ENST00000604810 406 ntBASIC5.28□□□□□ -1.56
FOXN3O00409 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.28□□□□□ -1.56
FOXN3O00409 BMS1P21-201ENST00000634565 365 ntBASIC5.28□□□□□ -1.56
FOXN3O00409 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
FOXN3O00409 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
FOXN3O00409 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
FOXN3O00409 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.28□□□□□ -1.56
FOXN3O00409 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
FOXN3O00409 AC022031.1-201ENST00000585985 2593 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 AC000123.3-201ENST00000624029 4975 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
FOXN3O00409 AL512646.1-201ENST00000269395 1077 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 RNU6-83P-201ENST00000384568 112 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 TMSB4XP8-201ENST00000402089 135 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.27□□□□□ -1.57
FOXN3O00409 TMSB4XP6-201ENST00000415187 135 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.27□□□□□ -1.57
FOXN3O00409 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.27□□□□□ -1.57
FOXN3O00409 TMBIM7P-201ENST00000418074 855 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 TMSB4XP1-201ENST00000424567 135 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.27□□□□□ -1.57
FOXN3O00409 MTCO1P54-201ENST00000430139 712 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.27□□□□□ -1.57
FOXN3O00409 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.27□□□□□ -1.57
FOXN3O00409 RAB11AP1-201ENST00000442978 646 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 AL137845.2-201ENST00000444292 988 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 AC000111.2-201ENST00000448200 210 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 AC239809.1-201ENST00000450470 217 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 AC004263.1-201ENST00000479327 332 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 RN7SL319P-201ENST00000480656 221 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 RN7SL97P-201ENST00000486780 299 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.27□□□□□ -1.57
FOXN3O00409 AC023424.1-201ENST00000496058 459 ntBASIC5.27□□□□□ -1.57
FOXN3O00409 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms