Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 PSMB7P1-201ENST00000556349 514 ntBASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 KATNBL1P1-201ENST00000605192 748 ntBASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 AL023583.1-201ENST00000607518 1143 ntBASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 AL135786.2-201ENST00000608422 615 ntBASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 AC096586.2-201ENST00000610260 441 ntBASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 HPVC1-201ENST00000629899 1198 ntBASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 LINC00561-201ENST00000565815 2738 ntBASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM49D1C9J1S8 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
TRIM49D1C9J1S8 AL627171.1-201ENST00000618845 1308 ntBASIC3.96□□□□□ -1.77
TRIM49D1C9J1S8 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.96□□□□□ -1.77
TRIM49D1C9J1S8 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 AC006504.1-201ENST00000562493 3666 ntBASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 OR11H4-201ENST00000315409 1082 ntBASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 AL589826.1-201ENST00000340697 249 ntBASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 RNU6-1331P-201ENST00000363658 106 ntBASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 RNU6-564P-201ENST00000410983 104 ntBASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 RPL7AP73-201ENST00000413490 353 ntBASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 AC007064.3-201ENST00000422608 359 ntBASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 OR5BE1P-201ENST00000425977 939 ntBASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 HIGD1AP4-201ENST00000430194 280 ntBASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 RPL7P4-203ENST00000430239 730 ntBASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 RPS17P13-201ENST00000448974 407 ntBASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 snoU109.6-201ENST00000516831 118 ntBASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 HIGD1AP5-201ENST00000529959 259 ntBASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 FAM60CP-201ENST00000591086 664 ntBASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 AC068790.4-201ENST00000602474 263 ntBASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 OR5BE1P-202ENST00000641168 1176 ntBASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM49D1C9J1S8 AC090971.4-201ENST00000560291 1800 ntBASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 AC139713.2-214ENST00000642059 1811 ntBASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 IGKV7-3-201ENST00000357453 298 ntBASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 RNU6-386P-201ENST00000362650 107 ntBASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 RNA5SP399-201ENST00000364003 117 ntBASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 RNA5SP366-201ENST00000365454 123 ntBASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 RNU11-4P-201ENST00000391149 133 ntBASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 AL590806.1-201ENST00000415818 853 ntBASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 FAM204CP-201ENST00000424489 642 ntBASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 AL732292.1-201ENST00000426692 226 ntBASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 CNOT7P1-201ENST00000429006 852 ntBASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 AC083863.1-201ENST00000438811 231 ntBASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 ACTR3P2-201ENST00000439585 1257 ntBASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 AC092809.1-201ENST00000441469 474 ntBASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 AL606490.8-201ENST00000441624 319 ntBASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 TPT1P13-201ENST00000449760 499 ntBASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 C1DP3-201ENST00000455013 423 ntBASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 AC011276.1-201ENST00000469688 323 ntBASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 STRADBP1-201ENST00000478954 1281 ntBASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 AC110743.1-201ENST00000584870 478 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms