Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 AC079880.2-201ENST00000603790 1213 ntBASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 AL160290.3-201ENST00000604869 165 ntBASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 AL353726.1-201ENST00000614041 1000 ntBASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 AC067931.1-201ENST00000624190 671 ntBASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 AP003072.4-201ENST00000624580 310 ntBASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 AL137100.1-201ENST00000556703 1620 ntBASIC4.21□□□□□ -1.74
ATG4BQ9Y4P1 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 RNU1-130P-201ENST00000363930 160 ntBASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 RNU1-44P-201ENST00000384453 163 ntBASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 GTF2IP2-201ENST00000424290 697 ntBASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 RPL7P29-201ENST00000437151 728 ntBASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 UBE2V1P3-201ENST00000439651 417 ntBASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 IFNWP4-201ENST00000453148 294 ntBASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AC053481.1-201ENST00000467217 306 ntBASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AC092905.1-201ENST00000467527 949 ntBASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AC006511.1-201ENST00000470614 315 ntBASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 RN7SL817P-201ENST00000480777 288 ntBASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AC027338.1-201ENST00000514840 825 ntBASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AC090151.1-201ENST00000520784 730 ntBASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AC025260.1-201ENST00000548858 430 ntBASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AC090312.1-201ENST00000580637 348 ntBASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AP001160.4-201ENST00000596971 382 ntBASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 ABI1P1-201ENST00000603375 1120 ntBASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AC012409.3-201ENST00000611343 981 ntBASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 MIR378J-201ENST00000611988 109 ntBASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AC009237.17-201ENST00000618111 748 ntBASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 U6.48-201ENST00000618523 106 ntBASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 USP9YP4-201ENST00000424401 1745 ntBASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AC007529.1-201ENST00000418574 2178 ntBASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ATG4BQ9Y4P1 AC134882.1-201ENST00000603738 1676 ntBASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 SAGE2P-201ENST00000420011 2126 ntBASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 RNA5SP307-201ENST00000362863 116 ntBASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 ATP5F1P2-201ENST00000398143 760 ntBASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 RPS20P14-201ENST00000412545 360 ntBASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 VTA1P1-201ENST00000414044 866 ntBASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 TMSB10P2-201ENST00000416049 131 ntBASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 AL139095.3-201ENST00000419672 1203 ntBASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 ACTR3P2-201ENST00000439585 1257 ntBASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 RPS27AP15-201ENST00000447672 466 ntBASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 AC034205.1-201ENST00000520621 638 ntBASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 OR4R2P-201ENST00000530815 597 ntBASIC4.19□□□□□ -1.74
ATG4BQ9Y4P1 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms