Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 AP000827.1-201ENST00000527814 258 ntBASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 RFPL1S-203ENST00000539579 330 ntBASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 PCNAP1-202ENST00000595299 752 ntBASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 ZNF92P3-201ENST00000596594 954 ntBASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 AC022387.2-201ENST00000604050 448 ntBASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 RMST_9.1-201ENST00000619945 193 ntBASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 AP005019.3-201ENST00000620418 560 ntBASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 AC019278.1-201ENST00000623516 479 ntBASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 DHX40P1-201ENST00000588725 1412 ntBASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 RPS16P5-201ENST00000406501 404 ntBASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 RBMY2KP-201ENST00000418221 992 ntBASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 AL139095.3-201ENST00000419672 1203 ntBASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 NPM1P34-201ENST00000428821 893 ntBASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 LYPLA1P1-201ENST00000434514 622 ntBASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 AC105402.2-201ENST00000438503 358 ntBASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 AP002345.1-201ENST00000456493 928 ntBASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 RPL21P126-201ENST00000470049 478 ntBASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 PHBP17-201ENST00000528576 541 ntBASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 AC084783.1-201ENST00000565846 910 ntBASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 AL392112.1-201ENST00000605115 829 ntBASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 MIR432-201ENST00000606207 94 ntBASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 MARK2P15-201ENST00000432204 2186 ntBASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
RHBDD3Q9Y3P4 AL049737.1-201ENST00000413920 1403 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 AC079741.1-201ENST00000321498 212 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 RNU1-130P-201ENST00000363930 160 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 RNVU1-6-201ENST00000364688 164 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 AC069213.2-201ENST00000420238 366 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 RPL7P53-201ENST00000421245 739 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 RPEP3-201ENST00000425462 676 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 AL732292.1-201ENST00000426692 226 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 AC008065.1-201ENST00000428525 348 ntBASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.78□□□□□ -1.8
RHBDD3Q9Y3P4 BX119904.1-201ENST00000432026 348 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms