Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 EOGT-210ENST00000615922 1931 ntBASIC4.06□□□□□ -1.76
CTSFQ9UBX1 RN7SKP227-201ENST00000364445 330 ntBASIC4.06□□□□□ -1.76
CTSFQ9UBX1 RHOT1P2-201ENST00000366423 333 ntBASIC4.06□□□□□ -1.76
CTSFQ9UBX1 RNU1-44P-201ENST00000384453 163 ntBASIC4.06□□□□□ -1.76
CTSFQ9UBX1 AL356967.1-201ENST00000406305 431 ntBASIC4.06□□□□□ -1.76
CTSFQ9UBX1 RN7SKP167-201ENST00000411047 285 ntBASIC4.06□□□□□ -1.76
CTSFQ9UBX1 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CTSFQ9UBX1 AL157831.1-201ENST00000426134 473 ntBASIC4.06□□□□□ -1.76
CTSFQ9UBX1 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.06□□□□□ -1.76
CTSFQ9UBX1 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.06□□□□□ -1.76
CTSFQ9UBX1 AL451050.1-201ENST00000450126 415 ntBASIC4.06□□□□□ -1.76
CTSFQ9UBX1 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.06□□□□□ -1.76
CTSFQ9UBX1 RPL31P53-201ENST00000457065 348 ntBASIC4.06□□□□□ -1.76
CTSFQ9UBX1 RPL7P22-201ENST00000466005 733 ntBASIC4.06□□□□□ -1.76
CTSFQ9UBX1 FTH1P2-201ENST00000466086 412 ntBASIC4.06□□□□□ -1.76
CTSFQ9UBX1 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.06□□□□□ -1.76
CTSFQ9UBX1 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.06□□□□□ -1.76
CTSFQ9UBX1 RN7SKP21-201ENST00000516503 220 ntBASIC4.06□□□□□ -1.76
CTSFQ9UBX1 CYCSP28-201ENST00000534284 321 ntBASIC4.06□□□□□ -1.76
CTSFQ9UBX1 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CTSFQ9UBX1 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.06□□□□□ -1.76
CTSFQ9UBX1 AL161713.1-201ENST00000555538 145 ntBASIC4.06□□□□□ -1.76
CTSFQ9UBX1 AC025884.1-201ENST00000556034 378 ntBASIC4.06□□□□□ -1.76
CTSFQ9UBX1 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.06□□□□□ -1.76
CTSFQ9UBX1 AP001542.1-201ENST00000591314 200 ntBASIC4.06□□□□□ -1.76
CTSFQ9UBX1 RPL7P50-201ENST00000600588 727 ntBASIC4.06□□□□□ -1.76
CTSFQ9UBX1 AC083899.3-201ENST00000603413 594 ntBASIC4.06□□□□□ -1.76
CTSFQ9UBX1 AC115621.1-201ENST00000604653 858 ntBASIC4.06□□□□□ -1.76
CTSFQ9UBX1 AC092653.1-201ENST00000608509 531 ntBASIC4.06□□□□□ -1.76
CTSFQ9UBX1 AC139769.3-201ENST00000618383 175 ntBASIC4.06□□□□□ -1.76
CTSFQ9UBX1 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CTSFQ9UBX1 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CTSFQ9UBX1 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.06□□□□□ -1.76
CTSFQ9UBX1 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CTSFQ9UBX1 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 XIAPP3-201ENST00000312918 795 ntBASIC4.05□□□□□ -1.76
CTSFQ9UBX1 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 RNU1-14P-201ENST00000362759 152 ntBASIC4.05□□□□□ -1.76
CTSFQ9UBX1 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 RPS26P8-201ENST00000393490 348 ntBASIC4.05□□□□□ -1.76
CTSFQ9UBX1 AC240504.1-201ENST00000395709 845 ntBASIC4.05□□□□□ -1.76
CTSFQ9UBX1 AL035696.2-201ENST00000407941 709 ntBASIC4.05□□□□□ -1.76
CTSFQ9UBX1 RN7SKP177-201ENST00000410567 355 ntBASIC4.05□□□□□ -1.76
CTSFQ9UBX1 RN7SKP235-201ENST00000410662 305 ntBASIC4.05□□□□□ -1.76
CTSFQ9UBX1 VDAC1P9-201ENST00000412766 841 ntBASIC4.05□□□□□ -1.76
CTSFQ9UBX1 RPL30P3-201ENST00000424262 333 ntBASIC4.05□□□□□ -1.76
CTSFQ9UBX1 RPS27AP12-201ENST00000429552 465 ntBASIC4.05□□□□□ -1.76
CTSFQ9UBX1 FTH1P6-201ENST00000430768 320 ntBASIC4.05□□□□□ -1.76
CTSFQ9UBX1 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.05□□□□□ -1.76
CTSFQ9UBX1 UBE2V2P1-201ENST00000434717 398 ntBASIC4.05□□□□□ -1.76
CTSFQ9UBX1 AL512326.1-201ENST00000443050 721 ntBASIC4.05□□□□□ -1.76
CTSFQ9UBX1 AL157884.3-201ENST00000448273 1184 ntBASIC4.05□□□□□ -1.76
CTSFQ9UBX1 BUD31P2-201ENST00000449374 300 ntBASIC4.05□□□□□ -1.76
CTSFQ9UBX1 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 RPL21P71-201ENST00000465598 459 ntBASIC4.05□□□□□ -1.76
CTSFQ9UBX1 AL672167.3-201ENST00000465951 960 ntBASIC4.05□□□□□ -1.76
CTSFQ9UBX1 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 AC091917.2-201ENST00000505002 744 ntBASIC4.05□□□□□ -1.76
CTSFQ9UBX1 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 RPL23AP97-201ENST00000568955 471 ntBASIC4.05□□□□□ -1.76
CTSFQ9UBX1 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 AL161729.3-201ENST00000603533 673 ntBASIC4.05□□□□□ -1.76
CTSFQ9UBX1 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTSFQ9UBX1 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CTSFQ9UBX1 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTSFQ9UBX1 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.04□□□□□ -1.76
CTSFQ9UBX1 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CTSFQ9UBX1 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CTSFQ9UBX1 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CTSFQ9UBX1 U3.15-201ENST00000365398 212 ntBASIC4.04□□□□□ -1.76
CTSFQ9UBX1 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CTSFQ9UBX1 MIR3074-201ENST00000384885 81 ntBASIC4.04□□□□□ -1.76
CTSFQ9UBX1 RPS27AP11-201ENST00000402798 447 ntBASIC4.04□□□□□ -1.76
CTSFQ9UBX1 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.04□□□□□ -1.76
CTSFQ9UBX1 RNA5SP317-201ENST00000410176 116 ntBASIC4.04□□□□□ -1.76
CTSFQ9UBX1 MIR1911-201ENST00000410783 80 ntBASIC4.04□□□□□ -1.76
CTSFQ9UBX1 RNA5SP311-201ENST00000411290 116 ntBASIC4.04□□□□□ -1.76
CTSFQ9UBX1 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CTSFQ9UBX1 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.04□□□□□ -1.76
CTSFQ9UBX1 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.04□□□□□ -1.76
CTSFQ9UBX1 BTF3P10-201ENST00000433415 495 ntBASIC4.04□□□□□ -1.76
CTSFQ9UBX1 EEF1A1P1-201ENST00000447052 739 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms