Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 RNA5SP246-201ENST00000458909 119 ntBASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 OR52A4P-202ENST00000481634 799 ntBASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 SUMO1P1-201ENST00000497904 306 ntBASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 PGBD4P4-201ENST00000509673 613 ntBASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 RNU6-1308P-201ENST00000516817 103 ntBASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 HMGB1P46-201ENST00000520062 610 ntBASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 AC105233.3-201ENST00000531125 744 ntBASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 AP002967.1-201ENST00000624203 539 ntBASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
CLCF1Q9UBD9 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 OR10J6P-201ENST00000289731 930 ntBASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 AL589826.1-201ENST00000340697 249 ntBASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 MIR320B1-201ENST00000390209 79 ntBASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 SNORD66.1-201ENST00000391230 76 ntBASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 RNA5SP498-201ENST00000411342 120 ntBASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 CEACAMP8-201ENST00000413902 580 ntBASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 AL356095.1-201ENST00000417217 199 ntBASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 MRPL50P1-201ENST00000431951 384 ntBASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 RPL23AP46-201ENST00000438548 490 ntBASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 MTND6P18-201ENST00000439477 513 ntBASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 ARL4AP3-201ENST00000441452 574 ntBASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 HSFY6P-201ENST00000445573 403 ntBASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 MTND5P8-201ENST00000449817 1083 ntBASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 AC005008.1-201ENST00000456151 612 ntBASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 AC092691.2-201ENST00000461787 803 ntBASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 HMGB3P13-201ENST00000511263 607 ntBASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 HIGD1AP18-201ENST00000520730 278 ntBASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 AC023158.1-201ENST00000561632 1025 ntBASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 AC008759.1-201ENST00000589783 983 ntBASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 MTCO3P22-201ENST00000603219 784 ntBASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 AL118556.2-201ENST00000614375 824 ntBASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 AC107308.1-201ENST00000615897 301 ntBASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 RNA5SP196-201ENST00000625967 102 ntBASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 AL359715.4-201ENST00000606629 1436 ntBASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.77□□□□□ -1.81
CLCF1Q9UBD9 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.76□□□□□ -1.81
CLCF1Q9UBD9 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLCF1Q9UBD9 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLCF1Q9UBD9 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
CLCF1Q9UBD9 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.76□□□□□ -1.81
CLCF1Q9UBD9 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLCF1Q9UBD9 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CLCF1Q9UBD9 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLCF1Q9UBD9 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLCF1Q9UBD9 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CLCF1Q9UBD9 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
CLCF1Q9UBD9 MIR195-201ENST00000385194 87 ntBASIC3.76□□□□□ -1.81
CLCF1Q9UBD9 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CLCF1Q9UBD9 SNORA57.1-201ENST00000391227 145 ntBASIC3.76□□□□□ -1.81
CLCF1Q9UBD9 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.76□□□□□ -1.81
CLCF1Q9UBD9 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.76□□□□□ -1.81
CLCF1Q9UBD9 OR8G2P-201ENST00000412796 908 ntBASIC3.76□□□□□ -1.81
CLCF1Q9UBD9 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.76□□□□□ -1.81
CLCF1Q9UBD9 AC073136.2-201ENST00000417282 849 ntBASIC3.76□□□□□ -1.81
CLCF1Q9UBD9 RPS12P5-201ENST00000423449 371 ntBASIC3.76□□□□□ -1.81
CLCF1Q9UBD9 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.76□□□□□ -1.81
CLCF1Q9UBD9 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.76□□□□□ -1.81
CLCF1Q9UBD9 AC099063.2-201ENST00000446360 662 ntBASIC3.76□□□□□ -1.81
CLCF1Q9UBD9 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.76□□□□□ -1.81
CLCF1Q9UBD9 AL354710.1-201ENST00000453641 246 ntBASIC3.76□□□□□ -1.81
CLCF1Q9UBD9 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms