Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AL583835.1-201ENST00000399570 407 ntBASIC8.65□□□□□ -1.02
RTN4Q9NQC3 RNU2-43P-201ENST00000410306 190 ntBASIC8.65□□□□□ -1.02
RTN4Q9NQC3 RN7SKP261-201ENST00000410948 278 ntBASIC8.65□□□□□ -1.02
RTN4Q9NQC3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC8.65□□□□□ -1.02
RTN4Q9NQC3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC8.65□□□□□ -1.02
RTN4Q9NQC3 AL954705.1-201ENST00000435277 559 ntBASIC8.65□□□□□ -1.02
RTN4Q9NQC3 ACTP1-201ENST00000440793 383 ntBASIC8.65□□□□□ -1.02
RTN4Q9NQC3 RN7SL854P-201ENST00000459767 295 ntBASIC8.65□□□□□ -1.02
RTN4Q9NQC3 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
RTN4Q9NQC3 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC8.65□□□□□ -1.02
RTN4Q9NQC3 RN7SL241P-201ENST00000482973 236 ntBASIC8.65□□□□□ -1.02
RTN4Q9NQC3 AC068587.1-201ENST00000483613 781 ntBASIC8.65□□□□□ -1.02
RTN4Q9NQC3 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC8.65□□□□□ -1.02
RTN4Q9NQC3 BCAP31P2-201ENST00000563143 399 ntBASIC8.65□□□□□ -1.02
RTN4Q9NQC3 BCAP31P1-201ENST00000565437 385 ntBASIC8.65□□□□□ -1.02
RTN4Q9NQC3 AC106782.4-201ENST00000568264 210 ntBASIC8.65□□□□□ -1.02
RTN4Q9NQC3 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
RTN4Q9NQC3 MIR4664-201ENST00000583819 71 ntBASIC8.65□□□□□ -1.02
RTN4Q9NQC3 IGLJCOR18-201ENST00000584002 424 ntBASIC8.65□□□□□ -1.02
RTN4Q9NQC3 AL138889.2-201ENST00000603883 242 ntBASIC8.65□□□□□ -1.02
RTN4Q9NQC3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC8.65□□□□□ -1.02
RTN4Q9NQC3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC8.65□□□□□ -1.02
RTN4Q9NQC3 AC007546.1-201ENST00000619452 559 ntBASIC8.65□□□□□ -1.02
RTN4Q9NQC3 AP000590.1-201ENST00000624943 464 ntBASIC8.65□□□□□ -1.02
RTN4Q9NQC3 AC092747.4-201ENST00000620519 1861 ntBASIC8.65□□□□□ -1.02
RTN4Q9NQC3 AL442639.1-201ENST00000625030 1899 ntBASIC8.65□□□□□ -1.02
RTN4Q9NQC3 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
RTN4Q9NQC3 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
RTN4Q9NQC3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC8.65□□□□□ -1.03
RTN4Q9NQC3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC8.65□□□□□ -1.03
RTN4Q9NQC3 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC8.65□□□□□ -1.03
RTN4Q9NQC3 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
RTN4Q9NQC3 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 AL033543.1-201ENST00000623440 13454 ntBASIC8.64□□□□□ -1.03
RTN4Q9NQC3 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 AC138907.8-201ENST00000623981 2256 ntBASIC8.64□□□□□ -1.03
RTN4Q9NQC3 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 AC006511.3-201ENST00000624929 1783 ntBASIC8.64□□□□□ -1.03
RTN4Q9NQC3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 FCAR-201ENST00000345937 608 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 RNU1-11P-201ENST00000383975 164 ntBASIC8.64□□□□□ -1.03
RTN4Q9NQC3 TRBV7-5-201ENST00000390382 345 ntBASIC8.64□□□□□ -1.03
RTN4Q9NQC3 RNU6-712P-201ENST00000410558 100 ntBASIC8.64□□□□□ -1.03
RTN4Q9NQC3 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 RPS7P8-201ENST00000418311 581 ntBASIC8.64□□□□□ -1.03
RTN4Q9NQC3 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 AC012594.1-235ENST00000424391 727 ntTSL 5 BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 OR2AH1P-201ENST00000425717 928 ntBASIC8.64□□□□□ -1.03
RTN4Q9NQC3 MTRF1-204ENST00000430347 557 ntTSL 5 BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 AC004866.2-201ENST00000438285 481 ntBASIC8.64□□□□□ -1.03
RTN4Q9NQC3 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 DAZAP2P1-201ENST00000475212 503 ntBASIC8.64□□□□□ -1.03
RTN4Q9NQC3 AC018475.1-201ENST00000478358 465 ntBASIC8.64□□□□□ -1.03
RTN4Q9NQC3 AC018695.1-201ENST00000484096 664 ntBASIC8.64□□□□□ -1.03
RTN4Q9NQC3 CR383656.1-201ENST00000484916 377 ntBASIC8.64□□□□□ -1.03
RTN4Q9NQC3 AC008592.1-201ENST00000503091 665 ntTSL 3 BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 AC098591.2-201ENST00000510152 315 ntBASIC8.64□□□□□ -1.03
RTN4Q9NQC3 RNU6-685P-201ENST00000517088 95 ntBASIC8.64□□□□□ -1.03
RTN4Q9NQC3 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 LINC02365-203ENST00000522554 802 ntTSL 2 BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 PPP1R1AP1-201ENST00000525622 425 ntBASIC8.64□□□□□ -1.03
RTN4Q9NQC3 AP000916.2-201ENST00000528904 286 ntBASIC8.64□□□□□ -1.03
RTN4Q9NQC3 PRB4-203ENST00000535904 796 ntAPPRIS P3 TSL 2 BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 AL157955.2-202ENST00000553921 467 ntTSL 3 BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 BNIP3P22-201ENST00000593399 556 ntBASIC8.64□□□□□ -1.03
RTN4Q9NQC3 AC008737.3-201ENST00000601661 221 ntTSL 3 BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 RBM22P6-201ENST00000611682 867 ntBASIC8.64□□□□□ -1.03
RTN4Q9NQC3 AC099669.2-201ENST00000616549 437 ntBASIC8.64□□□□□ -1.03
RTN4Q9NQC3 AL589994.2-201ENST00000621124 579 ntBASIC8.64□□□□□ -1.03
RTN4Q9NQC3 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RTN4Q9NQC3 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 TRIM60P14-201ENST00000513444 1419 ntBASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms