Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 LINC00622-201ENST00000562811 1570 ntBASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TM9SF3Q9HD45 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 RNU1-132P-201ENST00000364300 164 ntBASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 RNU4-31P-201ENST00000384211 141 ntBASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 OR4C10P-201ENST00000434991 931 ntBASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 AC069285.2-201ENST00000440210 275 ntBASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 AC108022.1-201ENST00000493466 478 ntBASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 AC010285.3-201ENST00000511668 676 ntBASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 AC016550.3-201ENST00000515706 767 ntBASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 AC008676.3-201ENST00000521237 435 ntBASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 EIF1AXP2-201ENST00000555940 413 ntBASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 uc_338.13-201ENST00000618243 179 ntBASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 MIR7154-201ENST00000620673 73 ntBASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.42□□□□□ -1.7
TM9SF3Q9HD45 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 AC025125.1-201ENST00000624743 1922 ntBASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 MIR383-201ENST00000362257 73 ntBASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 MIR331-201ENST00000362302 94 ntBASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 RNU1-64P-201ENST00000365443 163 ntBASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 RNU6-185P-201ENST00000384421 107 ntBASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 AC025750.1-201ENST00000399891 379 ntBASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 RNA5SP317-201ENST00000410176 116 ntBASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 RNA5SP311-201ENST00000411290 116 ntBASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 RPL23AP38-201ENST00000423801 469 ntBASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 CEACAMP1-201ENST00000434624 1035 ntBASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 AC012671.1-201ENST00000451912 203 ntBASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 RPS27AP17-201ENST00000463344 455 ntBASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 RPS7P7-201ENST00000463499 571 ntBASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 AP000926.1-201ENST00000479573 241 ntBASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 AC108475.1-201ENST00000507880 950 ntBASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 RNA5SP315-201ENST00000516340 116 ntBASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 RNA5SP312-201ENST00000517068 116 ntBASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 TRAV8-5-201ENST00000537369 341 ntBASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 AC069240.1-201ENST00000548774 375 ntBASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 AC009268.1-201ENST00000561352 1203 ntBASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 MTND6P33-201ENST00000571794 183 ntBASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 MIR548Y-201ENST00000582739 110 ntBASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 AL591034.3-201ENST00000605511 685 ntBASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 RNA5SP196-201ENST00000625967 102 ntBASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TM9SF3Q9HD45 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms