Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.7□□□□□ -1.66
PCDH9Q9HC56 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.7□□□□□ -1.66
PCDH9Q9HC56 AC010201.1-201ENST00000605051 540 ntBASIC4.7□□□□□ -1.66
PCDH9Q9HC56 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDH9Q9HC56 AC009974.1-201ENST00000608881 455 ntBASIC4.7□□□□□ -1.66
PCDH9Q9HC56 AL356274.1-201ENST00000617064 410 ntBASIC4.7□□□□□ -1.66
PCDH9Q9HC56 AC009159.2-201ENST00000617603 606 ntBASIC4.7□□□□□ -1.66
PCDH9Q9HC56 AC091905.2-201ENST00000623143 306 ntBASIC4.7□□□□□ -1.66
PCDH9Q9HC56 AC120338.1-201ENST00000625074 1541 ntBASIC4.7□□□□□ -1.66
PCDH9Q9HC56 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDH9Q9HC56 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCDH9Q9HC56 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDH9Q9HC56 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AC103591.2-201ENST00000265259 766 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 RNU6-532P-201ENST00000384318 107 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 RNU1-44P-201ENST00000384453 163 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 SSR1P2-201ENST00000415208 787 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 RPL23AP25-201ENST00000430973 463 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 ELOCP11-201ENST00000436690 332 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 YWHAZP2-201ENST00000440317 728 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 ELOCP16-201ENST00000444494 332 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 RPS27AP15-201ENST00000447672 466 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 SCARNA10-201ENST00000459255 330 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 APOOP2-201ENST00000461561 539 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AC104763.1-201ENST00000475274 360 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AC008897.1-201ENST00000494006 347 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 OR10V3P-201ENST00000525712 725 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AC125612.1-201ENST00000547580 377 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AC090181.2-201ENST00000602975 672 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AC079610.2-201ENST00000604818 690 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AL450336.1-201ENST00000605180 586 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AL365400.2-201ENST00000605604 902 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 RNU4-5P-201ENST00000607255 135 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 U3.53-201ENST00000628922 216 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 MTCO1P18-201ENST00000455518 1419 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 NEAT1-202ENST00000501122 22743 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 SEPT7P7-201ENST00000420492 1301 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AC125257.1-201ENST00000560400 2930 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AC105074.1-201ENST00000623380 3095 ntBASIC4.69□□□□□ -1.66
PCDH9Q9HC56 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 OR51H2P-202ENST00000641424 3046 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 RNA5SP22-201ENST00000365393 109 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 RNU1-63P-201ENST00000383902 164 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 AF228730.1-201ENST00000397972 663 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 RNU2-50P-201ENST00000410494 143 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 RN7SKP106-201ENST00000410832 272 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 LINC01347-201ENST00000417964 355 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 AC062016.2-201ENST00000420950 676 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 DPY19L1P2-201ENST00000426647 915 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 ETF1P3-201ENST00000430422 1160 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 AL359265.2-201ENST00000434367 631 ntBASIC4.68□□□□□ -1.66
PCDH9Q9HC56 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.68□□□□□ -1.66
PCDH9Q9HC56 CACYBPP1-201ENST00000438592 684 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms