Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ABCA3Q99758 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
ABCA3Q99758 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.05□□□□□ -1.6
ABCA3Q99758 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ABCA3Q99758 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
ABCA3Q99758 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
ABCA3Q99758 VN1R51P-201ENST00000411675 945 ntBASIC5.05□□□□□ -1.6
ABCA3Q99758 REREP1Y-201ENST00000422655 198 ntBASIC5.05□□□□□ -1.6
ABCA3Q99758 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.05□□□□□ -1.6
ABCA3Q99758 RPL21P110-201ENST00000433345 446 ntBASIC5.05□□□□□ -1.6
ABCA3Q99758 REREP2Y-201ENST00000439103 200 ntBASIC5.05□□□□□ -1.6
ABCA3Q99758 EIF4A1P11-201ENST00000451239 222 ntBASIC5.05□□□□□ -1.6
ABCA3Q99758 RPL21P10-201ENST00000463521 490 ntBASIC5.05□□□□□ -1.6
ABCA3Q99758 AL354976.1-201ENST00000613843 387 ntBASIC5.05□□□□□ -1.6
ABCA3Q99758 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
ABCA3Q99758 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
ABCA3Q99758 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
ABCA3Q99758 AL672167.1-205ENST00000641112 3080 ntBASIC5.05□□□□□ -1.6
ABCA3Q99758 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
ABCA3Q99758 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ABCA3Q99758 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
ABCA3Q99758 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.04□□□□□ -1.6
ABCA3Q99758 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ABCA3Q99758 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.04□□□□□ -1.6
ABCA3Q99758 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.04□□□□□ -1.6
ABCA3Q99758 RNA5SP120-201ENST00000410900 112 ntBASIC5.04□□□□□ -1.6
ABCA3Q99758 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.04□□□□□ -1.6
ABCA3Q99758 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.04□□□□□ -1.6
ABCA3Q99758 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.04□□□□□ -1.6
ABCA3Q99758 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.04□□□□□ -1.6
ABCA3Q99758 RSL24D1P3-201ENST00000449255 495 ntBASIC5.04□□□□□ -1.6
ABCA3Q99758 RPL21P11-201ENST00000461458 483 ntBASIC5.04□□□□□ -1.6
ABCA3Q99758 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
ABCA3Q99758 AC010285.3-201ENST00000511668 676 ntBASIC5.04□□□□□ -1.6
ABCA3Q99758 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.04□□□□□ -1.6
ABCA3Q99758 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.04□□□□□ -1.6
ABCA3Q99758 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.04□□□□□ -1.6
ABCA3Q99758 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.04□□□□□ -1.6
ABCA3Q99758 AC116312.1-201ENST00000606841 314 ntBASIC5.04□□□□□ -1.6
ABCA3Q99758 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.04□□□□□ -1.6
ABCA3Q99758 AP000553.6-201ENST00000641242 118 ntBASIC5.04□□□□□ -1.6
ABCA3Q99758 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
ABCA3Q99758 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
ABCA3Q99758 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.04□□□□□ -1.6
ABCA3Q99758 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
ABCA3Q99758 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ABCA3Q99758 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.04□□□□□ -1.6
ABCA3Q99758 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ABCA3Q99758 AL442128.2-201ENST00000620246 1824 ntBASIC5.03□□□□□ -1.6
ABCA3Q99758 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ABCA3Q99758 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
ABCA3Q99758 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
ABCA3Q99758 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.03□□□□□ -1.6
ABCA3Q99758 AC097713.2-201ENST00000430199 356 ntBASIC5.03□□□□□ -1.6
ABCA3Q99758 RPL5P24-201ENST00000463742 885 ntBASIC5.03□□□□□ -1.6
ABCA3Q99758 AC097462.2-201ENST00000504623 481 ntBASIC5.03□□□□□ -1.6
ABCA3Q99758 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.03□□□□□ -1.6
ABCA3Q99758 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.03□□□□□ -1.6
ABCA3Q99758 AC010680.3-201ENST00000604215 520 ntBASIC5.03□□□□□ -1.6
ABCA3Q99758 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.03□□□□□ -1.6
ABCA3Q99758 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
ABCA3Q99758 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ABCA3Q99758 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
ABCA3Q99758 AC004656.1-201ENST00000568479 4951 ntBASIC5.03□□□□□ -1.6
ABCA3Q99758 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.03□□□□□ -1.6
ABCA3Q99758 CDY3P-201ENST00000454543 1618 ntBASIC5.03□□□□□ -1.6
ABCA3Q99758 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ABCA3Q99758 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ABCA3Q99758 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
ABCA3Q99758 VN1R8P-201ENST00000407739 893 ntBASIC5.03□□□□□ -1.6
ABCA3Q99758 MIR1251-201ENST00000408552 70 ntBASIC5.03□□□□□ -1.6
ABCA3Q99758 AC073063.1-201ENST00000434352 607 ntBASIC5.03□□□□□ -1.6
ABCA3Q99758 AC006484.1-201ENST00000435086 1884 ntBASIC5.03□□□□□ -1.6
ABCA3Q99758 Z75741.1-201ENST00000446793 314 ntBASIC5.03□□□□□ -1.6
ABCA3Q99758 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.03□□□□□ -1.6
ABCA3Q99758 AC084198.1-201ENST00000477747 402 ntBASIC5.03□□□□□ -1.6
ABCA3Q99758 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.03□□□□□ -1.6
ABCA3Q99758 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.03□□□□□ -1.6
ABCA3Q99758 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.03□□□□□ -1.6
ABCA3Q99758 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.03□□□□□ -1.6
ABCA3Q99758 MIR6852-201ENST00000621699 66 ntBASIC5.03□□□□□ -1.6
ABCA3Q99758 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ABCA3Q99758 AC004944.1-201ENST00000517807 3059 ntBASIC5.02□□□□□ -1.61
ABCA3Q99758 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.02□□□□□ -1.61
ABCA3Q99758 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
ABCA3Q99758 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ABCA3Q99758 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ABCA3Q99758 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.02□□□□□ -1.61
ABCA3Q99758 RNA5SP50-201ENST00000363731 107 ntBASIC5.02□□□□□ -1.61
ABCA3Q99758 SNORA3C-201ENST00000408792 125 ntBASIC5.02□□□□□ -1.61
ABCA3Q99758 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.02□□□□□ -1.61
ABCA3Q99758 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.02□□□□□ -1.61
ABCA3Q99758 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.02□□□□□ -1.61
ABCA3Q99758 LSM3P2-201ENST00000551246 273 ntBASIC5.02□□□□□ -1.61
ABCA3Q99758 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.02□□□□□ -1.61
ABCA3Q99758 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC5.02□□□□□ -1.61
ABCA3Q99758 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ABCA3Q99758 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ABCA3Q99758 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
ABCA3Q99758 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms