Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTCHD1Q96NR3 AF287957.1-201ENST00000607368 1595 ntBASIC5.63□□□□□ -1.51
PTCHD1Q96NR3 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AC022164.1-201ENST00000568767 2673 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 OR4A15-201ENST00000314706 1035 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 RNA5SP477-201ENST00000362639 119 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 RNU6-809P-201ENST00000384461 107 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 RNU6-780P-201ENST00000391030 104 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 snosnR66.1-201ENST00000391095 99 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 RPL35AP3-201ENST00000414680 288 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AC015977.1-201ENST00000418887 292 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 RWDD4P2-201ENST00000426392 563 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AL512605.1-202ENST00000441919 381 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 GAPDHP17-201ENST00000449858 1001 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 ACA64.4-201ENST00000459070 127 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AC104164.1-201ENST00000460282 590 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AC094085.1-201ENST00000468914 584 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 RN7SL193P-201ENST00000491708 276 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 KLRA1P-201ENST00000503499 986 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AC008629.2-201ENST00000503783 483 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 ARL4AP2-201ENST00000507378 601 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 SCARNA18.1-201ENST00000516330 83 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 RNU6-875P-201ENST00000516488 106 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AK6P1-201ENST00000540219 478 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 ZNF322P1-201ENST00000568013 1209 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AL117336.2-201ENST00000602435 335 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AL121757.2-201ENST00000611223 313 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 MIR6809-201ENST00000612189 116 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 MIR6793-201ENST00000612376 63 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AL162377.2-201ENST00000624532 337 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AC005618.4-201ENST00000625053 554 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AC131971.1-201ENST00000332881 1482 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 AC005225.5-201ENST00000623547 2225 ntBASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCHD1Q96NR3 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 RNA5SP273-201ENST00000362484 113 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 RNU6-251P-201ENST00000363235 104 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 RNU4-76P-201ENST00000364509 141 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 RNU6-1009P-201ENST00000390996 107 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 RNU4-55P-201ENST00000410731 137 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 MYL6P5-201ENST00000412707 459 ntBASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.61□□□□□ -1.51
PTCHD1Q96NR3 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms