Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC011155.1-201ENST00000316512 456 ntBASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 RNA5SP428-201ENST00000365129 132 ntBASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 OR52E6-202ENST00000379946 954 ntBASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 RNU6-575P-201ENST00000411326 105 ntBASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 AF186996.5-201ENST00000418098 904 ntBASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 NPM1P33-201ENST00000438918 872 ntBASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 AL356981.1-201ENST00000454879 684 ntBASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 BX248409.1-201ENST00000455497 255 ntBASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 GYG1P1-201ENST00000460864 698 ntBASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 AC026348.1-201ENST00000462549 1053 ntBASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 MTND2P14-201ENST00000482139 351 ntBASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 NIP7P2-201ENST00000485801 544 ntBASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 RNU5A-4P-201ENST00000516588 111 ntBASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 HMGN2P6-201ENST00000551091 273 ntBASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 AADACP1-206ENST00000561502 1193 ntBASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 AGGF1P6-201ENST00000569213 976 ntBASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 AP005137.2-201ENST00000609238 400 ntBASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 AP000255.1-201ENST00000610276 676 ntBASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 AL353726.1-201ENST00000614041 1000 ntBASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 AP002799.1-201ENST00000623552 423 ntBASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 ATE1-AS1-202ENST00000636460 506 ntBASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 OR2L1P-202ENST00000641567 1023 ntBASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 RNA5SP305-201ENST00000362665 119 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 RNU4-4P-201ENST00000364588 130 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 SNORD116-2-201ENST00000384274 95 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 RNU6-83P-201ENST00000384568 112 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 SNORD116-6-201ENST00000384711 96 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 AC013442.1-201ENST00000397347 228 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 SFR1P1-201ENST00000403720 688 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 GSTM3P2-201ENST00000412746 530 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 RHOT1P3-201ENST00000436571 331 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 RPS7P5-201ENST00000441482 581 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 CEACAMP7-201ENST00000444105 496 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 EXTL2P1-201ENST00000446218 416 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 snoU13.20-201ENST00000459180 104 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 RPS17P2-201ENST00000461663 408 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 AC010486.2-201ENST00000505572 483 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 AC098799.3-201ENST00000506095 438 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 IGBP1P5-201ENST00000507524 1000 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 AC118465.1-201ENST00000513820 1271 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 SMARCE1P4-201ENST00000523647 241 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 AC091515.1-201ENST00000548110 679 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 AC233702.9-201ENST00000581528 203 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 AC013444.2-201ENST00000603317 787 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 AP003392.5-201ENST00000607857 415 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 AC093783.1-201ENST00000612976 329 ntBASIC5.56□□□□□ -1.52
CDK5RAP3Q96JB5 AC037198.3-201ENST00000616754 526 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms