Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AL592437.1-201ENST00000443781 492 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AC234781.3-201ENST00000452540 973 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AC133473.1-201ENST00000455173 299 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AC010469.1-201ENST00000463864 576 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 MYL12AP1-201ENST00000518490 515 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 HIGD1AP6-201ENST00000521833 279 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AP003102.1-201ENST00000525638 661 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 MORF4L1P3-201ENST00000525966 950 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AP003066.2-201ENST00000529375 555 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 PTP4A1P6-201ENST00000531034 478 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AC124068.1-201ENST00000563131 678 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AC012146.2-201ENST00000576545 416 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 RN7SL802P-201ENST00000577858 299 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 MIR5699-201ENST00000578903 90 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AP001180.3-201ENST00000582221 145 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 SLC25A36P1-201ENST00000590111 465 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AC020910.3-201ENST00000603701 874 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AC009948.4-201ENST00000604692 675 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AC113194.1-201ENST00000606037 500 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AC013468.1-201ENST00000608680 598 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AC005156.1-201ENST00000613371 573 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AC007275.1-201ENST00000621243 671 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AP003476.1-201ENST00000623984 516 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AL356118.1-201ENST00000635272 1078 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AC106858.1-201ENST00000637497 429 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AC107081.3-201ENST00000612715 2034 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 MTND4P8-201ENST00000514997 1362 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 AC138393.1-206ENST00000540997 1886 ntBASIC4.49□□□□□ -1.69
VPS33AQ96AX1 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS33AQ96AX1 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VPS33AQ96AX1 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS33AQ96AX1 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS33AQ96AX1 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS33AQ96AX1 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS33AQ96AX1 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS33AQ96AX1 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS33AQ96AX1 RNU5B-1-201ENST00000363286 116 ntBASIC4.48□□□□□ -1.69
VPS33AQ96AX1 RNU5B-4P-201ENST00000363508 111 ntBASIC4.48□□□□□ -1.69
VPS33AQ96AX1 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
VPS33AQ96AX1 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VPS33AQ96AX1 RNU6-1257P-201ENST00000384625 110 ntBASIC4.48□□□□□ -1.69
VPS33AQ96AX1 MIR223-201ENST00000385204 110 ntBASIC4.48□□□□□ -1.69
VPS33AQ96AX1 U3.30-201ENST00000391308 210 ntBASIC4.48□□□□□ -1.69
VPS33AQ96AX1 AP002530.1-201ENST00000405705 684 ntBASIC4.48□□□□□ -1.69
VPS33AQ96AX1 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS33AQ96AX1 AC069282.1-201ENST00000411911 526 ntBASIC4.48□□□□□ -1.69
VPS33AQ96AX1 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS33AQ96AX1 RWDD4P2-201ENST00000426392 563 ntBASIC4.48□□□□□ -1.69
VPS33AQ96AX1 AC069285.2-201ENST00000440210 275 ntBASIC4.48□□□□□ -1.69
VPS33AQ96AX1 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS33AQ96AX1 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS33AQ96AX1 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.48□□□□□ -1.69
VPS33AQ96AX1 TRY2P-201ENST00000448860 689 ntBASIC4.48□□□□□ -1.69
VPS33AQ96AX1 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.48□□□□□ -1.69
VPS33AQ96AX1 ATP5G1P3-201ENST00000463301 410 ntBASIC4.48□□□□□ -1.69
VPS33AQ96AX1 RPL21P71-201ENST00000465598 459 ntBASIC4.48□□□□□ -1.69
VPS33AQ96AX1 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS33AQ96AX1 AC140172.1-201ENST00000502928 141 ntBASIC4.48□□□□□ -1.69
VPS33AQ96AX1 AC093801.2-201ENST00000503966 1050 ntBASIC4.48□□□□□ -1.69
VPS33AQ96AX1 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS33AQ96AX1 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VPS33AQ96AX1 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
VPS33AQ96AX1 RNU6-488P-201ENST00000515918 99 ntBASIC4.48□□□□□ -1.69
VPS33AQ96AX1 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.48□□□□□ -1.69
VPS33AQ96AX1 AC006518.2-201ENST00000542513 940 ntBASIC4.48□□□□□ -1.69
VPS33AQ96AX1 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.48□□□□□ -1.69
VPS33AQ96AX1 AC133555.2-201ENST00000550213 292 ntBASIC4.48□□□□□ -1.69
VPS33AQ96AX1 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.48□□□□□ -1.69
VPS33AQ96AX1 MTCO1P40-201ENST00000574371 625 ntBASIC4.48□□□□□ -1.69
VPS33AQ96AX1 MIR1269B-201ENST00000580405 75 ntBASIC4.48□□□□□ -1.69
VPS33AQ96AX1 AC022726.1-201ENST00000587475 207 ntBASIC4.48□□□□□ -1.69
VPS33AQ96AX1 AC008687.2-201ENST00000597865 520 ntBASIC4.48□□□□□ -1.69
VPS33AQ96AX1 AC011445.2-201ENST00000599274 173 ntBASIC4.48□□□□□ -1.69
VPS33AQ96AX1 AC005014.3-201ENST00000605985 190 ntBASIC4.48□□□□□ -1.69
VPS33AQ96AX1 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms