Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 AC012417.1-201ENST00000582307 1039 ntBASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 AC023043.4-201ENST00000612081 449 ntBASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 FAM27D1-201ENST00000612308 341 ntBASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 OR11H5P-202ENST00000641612 1325 ntBASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 AC011155.1-201ENST00000316512 456 ntBASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 RNU1-14P-201ENST00000362759 152 ntBASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 RNA5SP509-201ENST00000364577 119 ntBASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 RNU6-178P-201ENST00000384631 104 ntBASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 MIR1251-201ENST00000408552 70 ntBASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 AL592293.2-201ENST00000422292 996 ntBASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 CHIAP3-201ENST00000423668 1133 ntBASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 RPEP3-201ENST00000425462 676 ntBASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 RSL24D1P6-201ENST00000426934 401 ntBASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 AC103987.1-201ENST00000473394 348 ntBASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 RPL29P14-201ENST00000495837 428 ntBASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 PRELID3BP7-201ENST00000503606 469 ntBASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 AC004069.2-201ENST00000505438 1114 ntBASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 AC106806.2-201ENST00000509365 500 ntBASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 AL133457.1-201ENST00000564251 987 ntBASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 AC023575.1-201ENST00000580510 358 ntBASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 AL590392.1-201ENST00000604960 446 ntBASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 AL135786.2-201ENST00000608422 615 ntBASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 AC012409.3-201ENST00000611343 981 ntBASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 AC090246.1-201ENST00000616499 426 ntBASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC112Q8NEF3 AC009951.1-201ENST00000623674 2614 ntBASIC4.43□□□□□ -1.7
CCDC112Q8NEF3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC112Q8NEF3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC112Q8NEF3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CCDC112Q8NEF3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC112Q8NEF3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC112Q8NEF3 ATP5F1P4-201ENST00000397288 746 ntBASIC4.43□□□□□ -1.7
CCDC112Q8NEF3 MIR1183-201ENST00000408856 89 ntBASIC4.43□□□□□ -1.7
CCDC112Q8NEF3 RN7SKP235-201ENST00000410662 305 ntBASIC4.43□□□□□ -1.7
CCDC112Q8NEF3 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.43□□□□□ -1.7
CCDC112Q8NEF3 HMGB3P10-201ENST00000434734 572 ntBASIC4.43□□□□□ -1.7
CCDC112Q8NEF3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC112Q8NEF3 AC243772.1-201ENST00000451620 410 ntBASIC4.43□□□□□ -1.7
CCDC112Q8NEF3 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC112Q8NEF3 RPL23AP24-201ENST00000458203 385 ntBASIC4.43□□□□□ -1.7
CCDC112Q8NEF3 AC011276.1-201ENST00000469688 323 ntBASIC4.43□□□□□ -1.7
CCDC112Q8NEF3 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.43□□□□□ -1.7
CCDC112Q8NEF3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.43□□□□□ -1.7
CCDC112Q8NEF3 AC020910.2-201ENST00000603635 610 ntBASIC4.43□□□□□ -1.7
CCDC112Q8NEF3 AL451044.1-201ENST00000604867 238 ntBASIC4.43□□□□□ -1.7
CCDC112Q8NEF3 AC090948.1-201ENST00000607464 549 ntBASIC4.43□□□□□ -1.7
CCDC112Q8NEF3 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC112Q8NEF3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CCDC112Q8NEF3 RAD17P1-201ENST00000418130 2042 ntBASIC4.43□□□□□ -1.7
CCDC112Q8NEF3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC112Q8NEF3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 ASNSP1-201ENST00000518311 1939 ntBASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 AC104297.1-201ENST00000393779 870 ntBASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 RNA5SP36-201ENST00000410197 133 ntBASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 RPL30P2-201ENST00000414021 291 ntBASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 MFSD13B-201ENST00000420133 1290 ntBASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 RPL17P36-201ENST00000420302 549 ntBASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 AL356387.2-201ENST00000422272 243 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms