Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ASNSP1-204ENST00000641977 1664 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AP001642.1-201ENST00000624727 2117 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 RNU1-87P-201ENST00000363727 170 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 RNU4-34P-201ENST00000410431 124 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 FCF1P9-201ENST00000412546 282 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 OR4K6P-201ENST00000416478 897 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 Z75741.2-201ENST00000417272 1167 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AC019050.1-201ENST00000418508 492 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AC114814.2-201ENST00000419195 485 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AL049610.1-201ENST00000423374 372 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AC012519.1-201ENST00000424588 610 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 MTCO1P19-201ENST00000443487 500 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AL589765.3-201ENST00000446084 462 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 EEF1A1P1-201ENST00000447052 739 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AC005002.1-201ENST00000447458 540 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 MTCYBP1-201ENST00000454315 1119 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AC073522.1-201ENST00000483312 377 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 RPL7P41-201ENST00000485823 957 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 Y_RNA.695-201ENST00000516715 107 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 RNA5SP34-201ENST00000516887 130 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 SEPT10P1-201ENST00000517342 1162 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 EIF1P4-201ENST00000572664 335 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AP005403.1-201ENST00000579720 229 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 MIR4505-201ENST00000582238 73 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 MIR3611-201ENST00000584484 83 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AF131215.7-201ENST00000602443 707 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AL359757.1-201ENST00000623176 255 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AL356121.2-201ENST00000624715 780 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AC068137.3-201ENST00000639191 341 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AC073869.6-201ENST00000640656 341 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AC090971.4-201ENST00000560291 1800 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 NCLP2-201ENST00000416078 1462 ntBASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.17□□□□□ -1.58
SIMC1Q8NDZ2 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.16□□□□□ -1.58
SIMC1Q8NDZ2 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SIMC1Q8NDZ2 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SIMC1Q8NDZ2 ANKRD36BP1-202ENST00000604892 1417 ntBASIC5.16□□□□□ -1.58
SIMC1Q8NDZ2 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
SIMC1Q8NDZ2 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SIMC1Q8NDZ2 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.16□□□□□ -1.58
SIMC1Q8NDZ2 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.16□□□□□ -1.58
SIMC1Q8NDZ2 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.16□□□□□ -1.58
SIMC1Q8NDZ2 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
SIMC1Q8NDZ2 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.16□□□□□ -1.58
SIMC1Q8NDZ2 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SIMC1Q8NDZ2 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SIMC1Q8NDZ2 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SIMC1Q8NDZ2 Y_RNA.560-201ENST00000384689 102 ntBASIC5.16□□□□□ -1.58
SIMC1Q8NDZ2 SNORA68.2-201ENST00000391263 128 ntBASIC5.16□□□□□ -1.58
SIMC1Q8NDZ2 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.16□□□□□ -1.58
SIMC1Q8NDZ2 RNU2-6P-201ENST00000411404 190 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms