Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 RN7SL689P-201ENST00000577215 297 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 SNORA70D-201ENST00000578836 135 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 OR5AH1P-201ENST00000595968 283 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AC244100.1-202ENST00000621554 382 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AL033543.1-201ENST00000623440 13454 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AC007114.2-201ENST00000576014 4281 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AC073365.1-203ENST00000641055 1992 ntBASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 Y_RNA.22-201ENST00000362492 102 ntBASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 RNA5SP260-201ENST00000363849 111 ntBASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 U3.11-201ENST00000364476 212 ntBASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 RNA5SP238-201ENST00000365464 120 ntBASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 RNY3P13-201ENST00000365542 102 ntBASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 RNU4-20P-201ENST00000365601 151 ntBASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 RNU6-474P-201ENST00000384243 107 ntBASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 RN7SKP271-201ENST00000410528 320 ntBASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 UQCRHP1-204ENST00000424609 274 ntBASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 PSMA6P3-201ENST00000428242 164 ntBASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 NIP7P1-201ENST00000433227 512 ntBASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 AC092013.1-201ENST00000438795 332 ntBASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 AC068587.1-201ENST00000483613 781 ntBASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 AP001029.3-201ENST00000588063 596 ntBASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 EXOSC3P2-201ENST00000594464 497 ntBASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 AC106900.2-201ENST00000604994 317 ntBASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 AC123768.4-201ENST00000616244 701 ntBASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 AC131009.3-201ENST00000621809 287 ntBASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 AKAP17BP-201ENST00000431706 2719 ntBASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 AC105114.1-201ENST00000624795 1862 ntBASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
DEPDC4Q8N2C3 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms