Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 NPM1P39-201ENST00000449818 867 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 RPS6P2-201ENST00000454208 705 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 BX248409.1-201ENST00000455497 255 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 NDUFA12P1-201ENST00000455914 406 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 METTL15P1-201ENST00000481421 1045 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AC073522.1-201ENST00000483312 377 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AC005912.1-201ENST00000495392 255 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AC092593.2-201ENST00000513866 913 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 HMGB1P23-201ENST00000518743 568 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 IGKV1-32-201ENST00000519290 311 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 IGKV2-36-201ENST00000519999 223 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AL049839.1-201ENST00000556151 657 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AC090751.1-201ENST00000566966 267 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 CCDC58P3-201ENST00000590792 430 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 CLIC4P2-201ENST00000601934 717 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AC007497.1-201ENST00000610421 561 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 FAM27B-201ENST00000610601 213 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AL022401.1-201ENST00000619498 108 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AP000676.4-201ENST00000624659 623 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 NCLP2-201ENST00000416078 1462 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AC009313.2-201ENST00000417893 1941 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 SOCS5P3-201ENST00000425115 1576 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AC138393.1-206ENST00000540997 1886 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AC008758.3-201ENST00000507003 1829 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AC079741.1-201ENST00000321498 212 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 U3.30-201ENST00000391308 210 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 RPS4XP9-201ENST00000405151 780 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 BX510359.2-201ENST00000417920 305 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AC114814.2-201ENST00000419195 485 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AL513175.2-201ENST00000422071 443 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AC092447.3-201ENST00000426027 686 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AC073069.1-201ENST00000428657 441 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 HMGB1P45-201ENST00000435986 653 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 NPM1P33-201ENST00000438918 872 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 NPM1P13-201ENST00000452663 865 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AL354710.1-201ENST00000453641 246 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AL513533.1-201ENST00000453728 415 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AL139824.2-201ENST00000458731 1095 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 RNU6-1218P-201ENST00000458990 108 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 RPL23AP71-201ENST00000470966 469 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 RN7SL459P-201ENST00000481078 302 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 MTND4LP2-201ENST00000502312 285 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 COX6B1P6-201ENST00000522347 255 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AC116553.2-201ENST00000564203 463 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AC104687.2-201ENST00000604442 342 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AC002487.1-201ENST00000604565 994 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AC010424.2-201ENST00000607594 443 ntBASIC4.47□□□□□ -1.69
BEST3Q8N1M1 AC009237.15-201ENST00000610252 501 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms