Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.42□□□□□ -1.7
SHFQ7M4L6 AL121776.1-201ENST00000429337 372 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.42□□□□□ -1.7
SHFQ7M4L6 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.42□□□□□ -1.7
SHFQ7M4L6 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.42□□□□□ -1.7
SHFQ7M4L6 AL008629.1-201ENST00000438615 184 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 AL138899.2-201ENST00000439139 499 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SHFQ7M4L6 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.42□□□□□ -1.7
SHFQ7M4L6 MRPL48P1-201ENST00000445390 636 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 KNOP1P3-201ENST00000446933 426 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SHFQ7M4L6 HMGB1P16-201ENST00000447155 540 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.42□□□□□ -1.7
SHFQ7M4L6 AC234781.3-201ENST00000452540 973 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 CYCSP34-201ENST00000458172 304 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 RPL7AP28-201ENST00000464513 571 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 AC046144.1-201ENST00000478559 1853 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 AC015724.1-201ENST00000478577 156 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 RPS21P4-201ENST00000487122 248 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.42□□□□□ -1.7
SHFQ7M4L6 AC113430.1-201ENST00000506872 718 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 snoU109.6-201ENST00000516831 118 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 Y_RNA.719-201ENST00000517156 106 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.42□□□□□ -1.7
SHFQ7M4L6 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.42□□□□□ -1.7
SHFQ7M4L6 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.42□□□□□ -1.7
SHFQ7M4L6 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.42□□□□□ -1.7
SHFQ7M4L6 AC091515.1-201ENST00000548110 679 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 NMNAT1P1-201ENST00000554095 876 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.42□□□□□ -1.7
SHFQ7M4L6 AC068714.1-201ENST00000559623 800 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.42□□□□□ -1.7
SHFQ7M4L6 BPTFP1-201ENST00000579209 492 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 SNORD95-201ENST00000579879 68 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.42□□□□□ -1.7
SHFQ7M4L6 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.42□□□□□ -1.7
SHFQ7M4L6 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.42□□□□□ -1.7
SHFQ7M4L6 MRPS35P3-201ENST00000603189 709 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 AL137072.1-201ENST00000603444 466 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 AC104687.2-201ENST00000604442 342 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 IMMP1LP1-201ENST00000605170 488 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 AL008729.2-201ENST00000606393 473 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SHFQ7M4L6 AL121890.2-201ENST00000617644 465 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 AC099494.2-201ENST00000623371 978 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.42□□□□□ -1.7
SHFQ7M4L6 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.42□□□□□ -1.7
SHFQ7M4L6 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHFQ7M4L6 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHFQ7M4L6 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHFQ7M4L6 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SHFQ7M4L6 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHFQ7M4L6 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SHFQ7M4L6 AC119744.1-201ENST00000454746 1715 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHFQ7M4L6 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SHFQ7M4L6 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SHFQ7M4L6 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHFQ7M4L6 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SHFQ7M4L6 OR5H2-201ENST00000355273 945 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SHFQ7M4L6 Y_RNA.192-201ENST00000363977 102 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 RNU6-619P-201ENST00000365146 108 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 OR52E6-202ENST00000379946 954 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 SNORD96B-201ENST00000386148 79 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.41□□□□□ -1.7
SHFQ7M4L6 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.41□□□□□ -1.7
SHFQ7M4L6 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.41□□□□□ -1.7
SHFQ7M4L6 OR51A3P-201ENST00000413596 924 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 DDX39BP1-205ENST00000422507 192 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 RPL7P4-203ENST00000430239 730 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.41□□□□□ -1.7
SHFQ7M4L6 AC092647.3-201ENST00000443044 633 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 IGHV5-78-201ENST00000450948 295 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.41□□□□□ -1.7
SHFQ7M4L6 PGAM1P13-201ENST00000507497 754 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 AC010285.3-201ENST00000511668 676 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 AC093755.1-201ENST00000512950 1023 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 RPS27AP18-201ENST00000515536 459 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 RN7SKP283-201ENST00000517197 270 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.41□□□□□ -1.7
SHFQ7M4L6 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.41□□□□□ -1.7
SHFQ7M4L6 COX6B1P6-201ENST00000522347 255 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.41□□□□□ -1.7
SHFQ7M4L6 PDCL2P2-201ENST00000533651 189 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.41□□□□□ -1.7
SHFQ7M4L6 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.41□□□□□ -1.7
SHFQ7M4L6 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.41□□□□□ -1.7
SHFQ7M4L6 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.41□□□□□ -1.7
SHFQ7M4L6 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.41□□□□□ -1.7
SHFQ7M4L6 FKBP1AP1-201ENST00000594588 318 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.41□□□□□ -1.7
SHFQ7M4L6 RNF138P2-201ENST00000603490 592 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 AC080013.3-201ENST00000606839 578 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms