Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
RFWD3Q6PCD5 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RFWD3Q6PCD5 DDX6P1-205ENST00000441966 1436 ntBASIC4.4□□□□□ -1.7
RFWD3Q6PCD5 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RFWD3Q6PCD5 AC009951.1-201ENST00000623674 2614 ntBASIC4.4□□□□□ -1.7
RFWD3Q6PCD5 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 SNORA70C-201ENST00000384538 135 ntBASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 RPS27AP11-201ENST00000402798 447 ntBASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 AL390879.2-203ENST00000426943 1121 ntBASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 AC012497.1-201ENST00000429392 575 ntBASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 AL691517.1-201ENST00000440833 1235 ntBASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 AL035551.1-201ENST00000446931 348 ntBASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 AC104306.1-201ENST00000449702 371 ntBASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 AP002345.1-201ENST00000456493 928 ntBASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 RPL7P19-201ENST00000469948 618 ntBASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 AC068587.1-201ENST00000483613 781 ntBASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 HMGB1P47-201ENST00000511281 589 ntBASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 KCTD9P2-201ENST00000512203 1013 ntBASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 AL109766.1-201ENST00000555080 552 ntBASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 AC068446.3-201ENST00000555285 382 ntBASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 OR1AB1P-201ENST00000585564 761 ntBASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 AL133247.2-201ENST00000603236 482 ntBASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 AC020910.2-201ENST00000603635 610 ntBASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 OR4H6P-202ENST00000603819 340 ntBASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 AC005972.3-201ENST00000606304 481 ntBASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 AL133370.2-201ENST00000619934 439 ntBASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 AC106730.3-201ENST00000624568 641 ntBASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RFWD3Q6PCD5 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 SNORA40.4-201ENST00000390971 128 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 SNORD65-201ENST00000391079 73 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 EIF1P3-201ENST00000423841 334 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 AL158073.1-201ENST00000426848 1104 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 COX6B1P7-201ENST00000430845 235 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 ELOCP18-201ENST00000434209 337 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 MTND2P2-201ENST00000434633 945 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 GSTA7P-201ENST00000438425 448 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 AL157884.3-201ENST00000448273 1184 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 AL162388.1-201ENST00000450912 352 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 RPL23AP81-201ENST00000455252 467 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 AC090543.1-201ENST00000492168 485 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 FABP5P6-201ENST00000510588 409 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 HMGB3P13-201ENST00000511263 607 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 MTCO1P35-201ENST00000515270 228 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 RNA5SP73-201ENST00000516744 108 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 RNU6-889P-201ENST00000517189 103 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 AC067904.2-201ENST00000517322 1283 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 VTA1P2-201ENST00000520205 911 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 AC006064.5-201ENST00000541782 248 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 SS18L2P2-201ENST00000583960 235 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 AC068790.5-201ENST00000602741 355 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 AC023043.4-201ENST00000612081 449 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 FAM27D1-201ENST00000612308 341 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 RMST_9.1-201ENST00000619945 193 ntBASIC4.39□□□□□ -1.71
RFWD3Q6PCD5 AC068831.8-201ENST00000620171 435 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms