Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 CYCSP28-201ENST00000534284 321 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AL512347.1-201ENST00000566420 503 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 MIR4504-201ENST00000577413 92 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AC107982.3-201ENST00000584957 985 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AC121247.2-201ENST00000604776 136 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AC245297.2-201ENST00000610119 565 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AC093783.1-201ENST00000612976 329 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AL096712.1-201ENST00000614561 159 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 MIR6071-201ENST00000616741 78 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AL607023.1-201ENST00000620045 248 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AP000648.2-201ENST00000624182 404 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AL596275.2-204ENST00000641628 552 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AL596275.2-206ENST00000641957 626 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
RNF220Q5VTB9 OR13C1P-202ENST00000641378 2919 ntBASIC5.09□□□□□ -1.6
RNF220Q5VTB9 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.09□□□□□ -1.6
RNF220Q5VTB9 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 MTND5P28-201ENST00000438005 1594 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 AC117529.2-201ENST00000512159 2068 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 BTBD10P1-201ENST00000549824 1352 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 CASC19-221ENST00000641309 1382 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 SRRM1P3-201ENST00000426911 2678 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 AC023490.2-201ENST00000359859 470 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 RNU4-44P-201ENST00000363050 141 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 RNU6-1122P-201ENST00000384449 107 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 MIR551A-201ENST00000385042 96 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 MIR1284-201ENST00000408337 120 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 AC007738.1-201ENST00000413892 348 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 RPS3AP9-201ENST00000417027 792 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 AC096632.1-201ENST00000427395 310 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 AL591503.2-201ENST00000442314 1005 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 AC005297.1-201ENST00000444765 862 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 SLC31A1P1-201ENST00000451221 567 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 AL122001.1-201ENST00000457027 370 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 MTCO3P2-201ENST00000457365 171 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 snoU13.7-201ENST00000459220 104 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 BZW1P2-201ENST00000473537 826 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 RPL5P23-201ENST00000496040 868 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 SNX5P1-201ENST00000505757 1041 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 AL671862.1-201ENST00000515851 349 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 AC087373.1-201ENST00000524920 491 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 SULT1C2P1-202ENST00000562418 459 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 AC022884.2-201ENST00000578535 580 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms