Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AC006042.3-201ENST00000454684 1469 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AP005901.5-201ENST00000545779 1796 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 ADAM5-202ENST00000399789 1942 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AL731566.1-201ENST00000620490 1937 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AC104623.2-202ENST00000623477 4002 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 TTC39DP-201ENST00000416781 1688 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 AC104454.1-201ENST00000421341 1401 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 DCAF13P3-201ENST00000561147 1334 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 AC008549.2-201ENST00000333482 706 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 RNU4-44P-201ENST00000363050 141 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 SNORA62-201ENST00000365493 153 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 RPS16P5-201ENST00000406501 404 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 RNU2-50P-201ENST00000410494 143 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 RN7SKP182-201ENST00000410772 298 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 AC019050.1-201ENST00000418508 492 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 AC090960.1-201ENST00000421072 306 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 AL009174.1-201ENST00000426577 416 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 RPS7P5-201ENST00000441482 581 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 EXTL2P1-201ENST00000446218 416 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 AC007327.1-201ENST00000447461 264 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 RHEBP2-201ENST00000450289 600 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 BX248409.1-201ENST00000455497 255 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 AP000797.2-201ENST00000475768 606 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 MTND4P2-201ENST00000507767 1203 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 AC118282.2-201ENST00000508739 374 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 FABP5P12-201ENST00000515543 389 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 AC009237.13-201ENST00000603193 276 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 AC099676.1-201ENST00000608886 657 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 AL627230.1-201ENST00000613077 211 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 AL591926.8-201ENST00000616876 211 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 LINC01355-201ENST00000566551 5444 ntBASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC44A4Q53GD3 BX005019.1-201ENST00000561881 1810 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 MTND4P22-201ENST00000413116 1169 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 DNAJC19P7-201ENST00000428811 344 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 MTCO3P21-201ENST00000430791 643 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 AC016712.1-201ENST00000431088 378 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 RHOT1P3-201ENST00000436571 331 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 AL031663.1-201ENST00000437445 219 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 RPS29P10-201ENST00000439197 166 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 AC092809.1-201ENST00000441469 474 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 MTCO2P3-201ENST00000442543 421 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 AC112498.1-201ENST00000444401 332 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 LINC02210-201ENST00000444561 288 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 AC079776.3-201ENST00000450665 370 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 ART2BP-201ENST00000453501 499 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 RN7SL385P-201ENST00000468873 276 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 AC011979.1-201ENST00000472300 483 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 AL161747.1-201ENST00000480068 358 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 MTND2P14-201ENST00000482139 351 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms