Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RN7SKP265-201ENST00000516448 223 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 RNA5SP135-201ENST00000517019 125 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.15□□□□□ -1.59
CCDC38Q502W7 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.15□□□□□ -1.59
CCDC38Q502W7 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC38Q502W7 OR5M2P-201ENST00000529003 936 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 AP001317.1-201ENST00000531194 960 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC38Q502W7 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC38Q502W7 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC38Q502W7 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC38Q502W7 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC38Q502W7 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC38Q502W7 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC38Q502W7 OR11J2P-201ENST00000555298 907 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC38Q502W7 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC38Q502W7 AP005119.2-201ENST00000579735 1105 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 CCDC58P3-201ENST00000590792 430 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC38Q502W7 AP003973.1-201ENST00000604639 691 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 AC016877.3-201ENST00000606778 504 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 RPSAP73-201ENST00000614820 330 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC38Q502W7 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC38Q502W7 AC006963.1-201ENST00000624003 1052 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 AC090506.2-201ENST00000624521 419 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC38Q502W7 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC38Q502W7 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC38Q502W7 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC38Q502W7 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC38Q502W7 TLK1P1-201ENST00000456760 2440 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CCDC38Q502W7 MTND4P8-201ENST00000514997 1362 ntBASIC5.15□□□□□ -1.59
CCDC38Q502W7 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CCDC38Q502W7 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC38Q502W7 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC38Q502W7 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC38Q502W7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC38Q502W7 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC38Q502W7 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC38Q502W7 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC38Q502W7 RNU6-839P-201ENST00000363347 108 ntBASIC5.14□□□□□ -1.59
CCDC38Q502W7 snoZ40.1-201ENST00000364540 72 ntBASIC5.14□□□□□ -1.59
CCDC38Q502W7 SNORA11B-201ENST00000408175 129 ntBASIC5.14□□□□□ -1.59
CCDC38Q502W7 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC38Q502W7 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC38Q502W7 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC38Q502W7 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.14□□□□□ -1.59
CCDC38Q502W7 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC38Q502W7 BX323845.1-201ENST00000432417 179 ntBASIC5.14□□□□□ -1.59
CCDC38Q502W7 OR52B5P-201ENST00000435337 951 ntBASIC5.14□□□□□ -1.59
CCDC38Q502W7 GTF2IP7-202ENST00000436677 309 ntBASIC5.14□□□□□ -1.59
CCDC38Q502W7 AC105402.2-201ENST00000438503 358 ntBASIC5.14□□□□□ -1.59
CCDC38Q502W7 PPIAP17-201ENST00000438507 471 ntBASIC5.14□□□□□ -1.59
CCDC38Q502W7 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.14□□□□□ -1.59
CCDC38Q502W7 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC38Q502W7 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.14□□□□□ -1.59
CCDC38Q502W7 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC38Q502W7 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CCDC38Q502W7 MTCO3P35-201ENST00000485582 781 ntBASIC5.14□□□□□ -1.59
CCDC38Q502W7 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC38Q502W7 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC38Q502W7 STMN1P2-201ENST00000508435 439 ntBASIC5.14□□□□□ -1.59
CCDC38Q502W7 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC38Q502W7 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC38Q502W7 AC109471.1-201ENST00000511631 612 ntBASIC5.14□□□□□ -1.59
CCDC38Q502W7 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC38Q502W7 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.14□□□□□ -1.59
CCDC38Q502W7 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC38Q502W7 AP001207.1-201ENST00000524051 481 ntBASIC5.14□□□□□ -1.59
CCDC38Q502W7 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC38Q502W7 MIR3912-201ENST00000577566 105 ntBASIC5.14□□□□□ -1.59
CCDC38Q502W7 AC011477.5-201ENST00000586571 259 ntBASIC5.14□□□□□ -1.59
CCDC38Q502W7 AP000255.1-201ENST00000610276 676 ntBASIC5.14□□□□□ -1.59
CCDC38Q502W7 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.14□□□□□ -1.59
CCDC38Q502W7 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC38Q502W7 OR52B5P-202ENST00000641118 1110 ntBASIC5.14□□□□□ -1.59
CCDC38Q502W7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC38Q502W7 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC38Q502W7 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC38Q502W7 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC38Q502W7 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CCDC38Q502W7 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC38Q502W7 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC38Q502W7 DBF4P1-201ENST00000412976 1892 ntBASIC5.13□□□□□ -1.59
CCDC38Q502W7 AC092435.4-201ENST00000623012 4159 ntBASIC5.13□□□□□ -1.59
CCDC38Q502W7 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC38Q502W7 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CCDC38Q502W7 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC38Q502W7 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC38Q502W7 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC38Q502W7 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CCDC38Q502W7 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC38Q502W7 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC38Q502W7 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC38Q502W7 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC38Q502W7 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC38Q502W7 EIF4A1P3-201ENST00000411521 244 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms