Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.18□□□□□ -1.9
SSBP1Q04837 AL137100.1-201ENST00000556703 1620 ntBASIC3.18□□□□□ -1.9
SSBP1Q04837 MTND5P12-201ENST00000502851 1449 ntBASIC3.18□□□□□ -1.9
SSBP1Q04837 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.17□□□□□ -1.9
SSBP1Q04837 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.17□□□□□ -1.9
SSBP1Q04837 AP001486.2-201ENST00000561652 5113 ntBASIC3.17□□□□□ -1.9
SSBP1Q04837 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC3.17□□□□□ -1.9
SSBP1Q04837 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SSBP1Q04837 AC079741.1-201ENST00000321498 212 ntBASIC3.17□□□□□ -1.9
SSBP1Q04837 RNA5SP42-201ENST00000364278 115 ntBASIC3.17□□□□□ -1.9
SSBP1Q04837 RNU11-4P-201ENST00000391149 133 ntBASIC3.17□□□□□ -1.9
SSBP1Q04837 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.17□□□□□ -1.9
SSBP1Q04837 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC3.17□□□□□ -1.9
SSBP1Q04837 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.17□□□□□ -1.9
SSBP1Q04837 SNORA71B-202ENST00000439232 272 ntBASIC3.17□□□□□ -1.9
SSBP1Q04837 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.17□□□□□ -1.9
SSBP1Q04837 NPM1P39-201ENST00000449818 867 ntBASIC3.17□□□□□ -1.9
SSBP1Q04837 Z95152.1-201ENST00000453556 656 ntBASIC3.17□□□□□ -1.9
SSBP1Q04837 ANP32BP2-201ENST00000454525 545 ntBASIC3.17□□□□□ -1.9
SSBP1Q04837 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.17□□□□□ -1.9
SSBP1Q04837 APOOP2-201ENST00000461561 539 ntBASIC3.17□□□□□ -1.9
SSBP1Q04837 TRBV8-2-201ENST00000475637 270 ntBASIC3.17□□□□□ -1.9
SSBP1Q04837 FCF1P3-201ENST00000496394 590 ntBASIC3.17□□□□□ -1.9
SSBP1Q04837 AK3P4-201ENST00000504283 583 ntBASIC3.17□□□□□ -1.9
SSBP1Q04837 RNA5SP208-201ENST00000516156 78 ntBASIC3.17□□□□□ -1.9
SSBP1Q04837 RN7SKP92-201ENST00000517266 244 ntBASIC3.17□□□□□ -1.9
SSBP1Q04837 NDUFA5P2-201ENST00000519723 344 ntBASIC3.17□□□□□ -1.9
SSBP1Q04837 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.17□□□□□ -1.9
SSBP1Q04837 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC3.17□□□□□ -1.9
SSBP1Q04837 AC138701.1-201ENST00000524329 714 ntBASIC3.17□□□□□ -1.9
SSBP1Q04837 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.17□□□□□ -1.9
SSBP1Q04837 AL161616.1-201ENST00000611867 286 ntBASIC3.17□□□□□ -1.9
SSBP1Q04837 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.17□□□□□ -1.9
SSBP1Q04837 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SSBP1Q04837 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SSBP1Q04837 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SSBP1Q04837 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.16□□□□□ -1.9
SSBP1Q04837 AC100871.1-201ENST00000507871 1456 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 AC095050.2-201ENST00000510748 1458 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 LARP1BP1-201ENST00000506036 1359 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
SSBP1Q04837 MIR383-201ENST00000362257 73 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 RNA5SP97-201ENST00000365006 84 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 RNU6-805P-201ENST00000365643 106 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SSBP1Q04837 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SSBP1Q04837 RN7SKP33-201ENST00000410942 340 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 RNA5SP31-201ENST00000411144 127 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SSBP1Q04837 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.16□□□□□ -1.9
SSBP1Q04837 Z97055.1-201ENST00000419730 712 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 AL390879.2-203ENST00000426943 1121 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.16□□□□□ -1.9
SSBP1Q04837 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.16□□□□□ -1.9
SSBP1Q04837 ARAFP2-201ENST00000440565 559 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 RN7SL329P-201ENST00000467740 299 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC3.16□□□□□ -1.9
SSBP1Q04837 AC041039.1-201ENST00000485656 536 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC3.16□□□□□ -1.9
SSBP1Q04837 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
SSBP1Q04837 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.16□□□□□ -1.9
SSBP1Q04837 AC108475.1-201ENST00000507880 950 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 TXNP6-201ENST00000510190 310 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.16□□□□□ -1.9
SSBP1Q04837 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.16□□□□□ -1.9
SSBP1Q04837 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 RNU6-579P-201ENST00000516879 102 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC3.16□□□□□ -1.9
SSBP1Q04837 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.16□□□□□ -1.9
SSBP1Q04837 PDCL2P2-201ENST00000533651 189 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 AL389895.1-201ENST00000554127 252 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 AC007424.1-203ENST00000554613 687 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.16□□□□□ -1.9
SSBP1Q04837 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.16□□□□□ -1.9
SSBP1Q04837 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.16□□□□□ -1.9
SSBP1Q04837 AC020915.5-201ENST00000596836 964 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SSBP1Q04837 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.16□□□□□ -1.9
SSBP1Q04837 BNIP3P38-201ENST00000601117 544 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 SNORA62.6-201ENST00000606322 83 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 AC016769.4-201ENST00000616893 535 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
SSBP1Q04837 CASC19-222ENST00000641321 1173 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SSBP1Q04837 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.16□□□□□ -1.9
SSBP1Q04837 AL132640.2-201ENST00000559968 1698 ntBASIC3.16□□□□□ -1.9
SSBP1Q04837 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SSBP1Q04837 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SSBP1Q04837 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SSBP1Q04837 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.16□□□□□ -1.9
SSBP1Q04837 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
SSBP1Q04837 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC3.15□□□□□ -1.9
SSBP1Q04837 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SSBP1Q04837 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SSBP1Q04837 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.15□□□□□ -1.9
SSBP1Q04837 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SSBP1Q04837 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
SSBP1Q04837 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms