Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC2.34□□□□□ -2.04
HSPG2P98160 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
HSPG2P98160 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
HSPG2P98160 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
HSPG2P98160 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC2.34□□□□□ -2.04
HSPG2P98160 RNA5SP303-201ENST00000516192 130 ntBASIC2.34□□□□□ -2.04
HSPG2P98160 SNORA70.18-201ENST00000516696 98 ntBASIC2.34□□□□□ -2.04
HSPG2P98160 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC2.34□□□□□ -2.04
HSPG2P98160 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.34□□□□□ -2.04
HSPG2P98160 AC069240.1-201ENST00000548774 375 ntBASIC2.34□□□□□ -2.04
HSPG2P98160 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC2.34□□□□□ -2.04
HSPG2P98160 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.04
HSPG2P98160 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
HSPG2P98160 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
HSPG2P98160 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
HSPG2P98160 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
HSPG2P98160 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC2.34□□□□□ -2.04
HSPG2P98160 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
HSPG2P98160 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
HSPG2P98160 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC2.33□□□□□ -2.04
HSPG2P98160 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
HSPG2P98160 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HSPG2P98160 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HSPG2P98160 AC073522.1-201ENST00000483312 377 ntBASIC2.33□□□□□ -2.04
HSPG2P98160 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.33□□□□□ -2.04
HSPG2P98160 OR7E13P-201ENST00000526052 910 ntBASIC2.33□□□□□ -2.04
HSPG2P98160 MIR5186-201ENST00000577504 120 ntBASIC2.33□□□□□ -2.04
HSPG2P98160 AC127024.5-201ENST00000580085 462 ntBASIC2.33□□□□□ -2.04
HSPG2P98160 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.33□□□□□ -2.04
HSPG2P98160 AC019278.1-201ENST00000623516 479 ntBASIC2.33□□□□□ -2.04
HSPG2P98160 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HSPG2P98160 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HSPG2P98160 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HSPG2P98160 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC2.33□□□□□ -2.04
HSPG2P98160 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
HSPG2P98160 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
HSPG2P98160 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HSPG2P98160 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.33□□□□□ -2.04
HSPG2P98160 AC011503.2-201ENST00000594230 1500 ntBASIC2.33□□□□□ -2.04
HSPG2P98160 OR56A5-201ENST00000340110 738 ntBASIC2.33□□□□□ -2.04
HSPG2P98160 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.33□□□□□ -2.04
HSPG2P98160 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.33□□□□□ -2.04
HSPG2P98160 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.33□□□□□ -2.04
HSPG2P98160 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
HSPG2P98160 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC2.33□□□□□ -2.04
HSPG2P98160 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.33□□□□□ -2.04
HSPG2P98160 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HSPG2P98160 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HSPG2P98160 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HSPG2P98160 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HSPG2P98160 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC2.33□□□□□ -2.04
HSPG2P98160 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HSPG2P98160 MIR133A2-201ENST00000347538 102 ntBASIC2.33□□□□□ -2.04
HSPG2P98160 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HSPG2P98160 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC2.33□□□□□ -2.04
HSPG2P98160 EIF4A1P1-201ENST00000420241 934 ntBASIC2.33□□□□□ -2.04
HSPG2P98160 AC000374.1-201ENST00000434698 1745 ntBASIC2.33□□□□□ -2.04
HSPG2P98160 AC024341.1-201ENST00000526444 1552 ntBASIC2.33□□□□□ -2.04
HSPG2P98160 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC2.33□□□□□ -2.04
HSPG2P98160 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.33□□□□□ -2.04
HSPG2P98160 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC2.33□□□□□ -2.04
HSPG2P98160 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC2.33□□□□□ -2.04
HSPG2P98160 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HSPG2P98160 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HSPG2P98160 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC2.33□□□□□ -2.04
HSPG2P98160 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
HSPG2P98160 RAC1P2-201ENST00000511164 579 ntBASIC2.33□□□□□ -2.04
HSPG2P98160 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC2.33□□□□□ -2.04
HSPG2P98160 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.33□□□□□ -2.04
HSPG2P98160 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HSPG2P98160 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
HSPG2P98160 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HSPG2P98160 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
HSPG2P98160 AL136131.1-201ENST00000406079 803 ntBASIC2.32□□□□□ -2.04
HSPG2P98160 AL121878.1-201ENST00000418638 859 ntBASIC2.32□□□□□ -2.04
HSPG2P98160 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.32□□□□□ -2.04
HSPG2P98160 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC2.32□□□□□ -2.04
HSPG2P98160 CYCSP35-201ENST00000451978 304 ntBASIC2.32□□□□□ -2.04
HSPG2P98160 BX276092.4-201ENST00000452056 248 ntBASIC2.32□□□□□ -2.04
HSPG2P98160 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC2.32□□□□□ -2.04
HSPG2P98160 RPL21P10-201ENST00000463521 490 ntBASIC2.32□□□□□ -2.04
HSPG2P98160 AC023141.12-201ENST00000512399 199 ntBASIC2.32□□□□□ -2.04
HSPG2P98160 RNA5SP208-201ENST00000516156 78 ntBASIC2.32□□□□□ -2.04
HSPG2P98160 AL157394.1-201ENST00000562983 1224 ntBASIC2.32□□□□□ -2.04
HSPG2P98160 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HSPG2P98160 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HSPG2P98160 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HSPG2P98160 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
HSPG2P98160 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HSPG2P98160 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
HSPG2P98160 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HSPG2P98160 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
HSPG2P98160 RNU1-44P-201ENST00000384453 163 ntBASIC2.32□□□□□ -2.04
HSPG2P98160 RPL32P34-201ENST00000486380 400 ntBASIC2.32□□□□□ -2.04
HSPG2P98160 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.32□□□□□ -2.04
HSPG2P98160 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC2.32□□□□□ -2.04
HSPG2P98160 AC063950.1-201ENST00000552036 308 ntBASIC2.32□□□□□ -2.04
HSPG2P98160 RPL23AP87-202ENST00000573039 466 ntBASIC2.32□□□□□ -2.04
HSPG2P98160 AC012417.1-201ENST00000582307 1039 ntBASIC2.32□□□□□ -2.04
HSPG2P98160 MIR4769-201ENST00000584126 77 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms