Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC011447.4-201ENST00000587562 111 ntBASIC4.03□□□□□ -1.76
CX3CL1P78423 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.03□□□□□ -1.76
CX3CL1P78423 AC091057.2-201ENST00000602594 792 ntBASIC4.03□□□□□ -1.76
CX3CL1P78423 AP003973.1-201ENST00000604639 691 ntBASIC4.03□□□□□ -1.76
CX3CL1P78423 AC090948.2-201ENST00000607363 564 ntBASIC4.03□□□□□ -1.76
CX3CL1P78423 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CX3CL1P78423 AC105227.2-201ENST00000615075 605 ntBASIC4.03□□□□□ -1.76
CX3CL1P78423 AC109809.1-201ENST00000619665 545 ntBASIC4.03□□□□□ -1.76
CX3CL1P78423 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.03□□□□□ -1.76
CX3CL1P78423 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CX3CL1P78423 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
CX3CL1P78423 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CX3CL1P78423 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.03□□□□□ -1.76
CX3CL1P78423 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CX3CL1P78423 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CX3CL1P78423 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CX3CL1P78423 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CX3CL1P78423 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CX3CL1P78423 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CX3CL1P78423 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.77
CX3CL1P78423 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CX3CL1P78423 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.02□□□□□ -1.77
CX3CL1P78423 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CX3CL1P78423 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CX3CL1P78423 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
CX3CL1P78423 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CX3CL1P78423 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CX3CL1P78423 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.02□□□□□ -1.77
CX3CL1P78423 AC114546.3-201ENST00000623582 1734 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CX3CL1P78423 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CX3CL1P78423 NACA3P-201ENST00000359690 648 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 SNORD116.1-201ENST00000365628 92 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 BMS1P3-201ENST00000372011 932 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CX3CL1P78423 MIR323B-201ENST00000385269 82 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 SNORD65.1-201ENST00000390889 71 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 AL139098.1-201ENST00000407291 389 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 U3.32-201ENST00000408116 212 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 RN7SKP199-201ENST00000410325 305 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.02□□□□□ -1.77
CX3CL1P78423 DDX39BP1-205ENST00000422507 192 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 IPMKP1-201ENST00000425988 855 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.02□□□□□ -1.77
CX3CL1P78423 DPRXP1-201ENST00000426312 460 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.02□□□□□ -1.77
CX3CL1P78423 MTCO1P54-201ENST00000430139 712 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.02□□□□□ -1.77
CX3CL1P78423 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.02□□□□□ -1.77
CX3CL1P78423 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.02□□□□□ -1.77
CX3CL1P78423 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CX3CL1P78423 YWHAZP8-201ENST00000436935 731 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.02□□□□□ -1.77
CX3CL1P78423 KNOP1P3-201ENST00000446933 426 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.02□□□□□ -1.77
CX3CL1P78423 NF1P3-201ENST00000457709 450 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.02□□□□□ -1.77
CX3CL1P78423 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.02□□□□□ -1.77
CX3CL1P78423 ARL4AP1-201ENST00000503220 705 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.02□□□□□ -1.77
CX3CL1P78423 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CX3CL1P78423 KRT19P6-201ENST00000510983 209 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CX3CL1P78423 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.02□□□□□ -1.77
CX3CL1P78423 RNU6-885P-201ENST00000516607 104 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.02□□□□□ -1.77
CX3CL1P78423 HMGB1P19-201ENST00000517578 577 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.02□□□□□ -1.77
CX3CL1P78423 AP001317.1-201ENST00000531194 960 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.02□□□□□ -1.77
CX3CL1P78423 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CX3CL1P78423 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.02□□□□□ -1.77
CX3CL1P78423 AC092490.3-201ENST00000545370 572 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 HAUS8P1-201ENST00000549005 542 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.02□□□□□ -1.77
CX3CL1P78423 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.02□□□□□ -1.77
CX3CL1P78423 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CX3CL1P78423 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.02□□□□□ -1.77
CX3CL1P78423 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.02□□□□□ -1.77
CX3CL1P78423 GAS5-AS1-201ENST00000602767 694 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 RNF138P2-201ENST00000603490 592 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 AC069545.1-201ENST00000605671 358 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 AC107952.2-201ENST00000606048 486 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 AP000894.4-201ENST00000610185 483 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 AC092106.3-201ENST00000611308 722 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 AP000676.4-201ENST00000624659 623 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 CYP1D1P-201ENST00000416662 1433 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.02□□□□□ -1.77
CX3CL1P78423 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CX3CL1P78423 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CX3CL1P78423 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CX3CL1P78423 AP001273.1-201ENST00000624493 3152 ntBASIC4.02□□□□□ -1.77
CX3CL1P78423 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CX3CL1P78423 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CX3CL1P78423 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CX3CL1P78423 SEPT7P7-201ENST00000420492 1301 ntBASIC4.01□□□□□ -1.77
CX3CL1P78423 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.01□□□□□ -1.77
CX3CL1P78423 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.01□□□□□ -1.77
CX3CL1P78423 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms