Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.77□□□□□ -1.65
RAE1P78406 RN7SL799P-201ENST00000475891 298 ntBASIC4.77□□□□□ -1.65
RAE1P78406 RAP1BP2-201ENST00000478270 544 ntBASIC4.77□□□□□ -1.65
RAE1P78406 ACTG1P13-201ENST00000486987 1043 ntBASIC4.77□□□□□ -1.65
RAE1P78406 OR2A20P-203ENST00000498397 1268 ntBASIC4.77□□□□□ -1.65
RAE1P78406 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.77□□□□□ -1.65
RAE1P78406 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.77□□□□□ -1.65
RAE1P78406 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.77□□□□□ -1.65
RAE1P78406 HNRNPKP5-201ENST00000515300 253 ntBASIC4.77□□□□□ -1.65
RAE1P78406 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.77□□□□□ -1.65
RAE1P78406 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.77□□□□□ -1.65
RAE1P78406 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.77□□□□□ -1.65
RAE1P78406 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RAE1P78406 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.77□□□□□ -1.65
RAE1P78406 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.77□□□□□ -1.65
RAE1P78406 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RAE1P78406 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.77□□□□□ -1.65
RAE1P78406 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.77□□□□□ -1.65
RAE1P78406 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.77□□□□□ -1.65
RAE1P78406 MIR4489-201ENST00000578869 62 ntBASIC4.77□□□□□ -1.65
RAE1P78406 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.77□□□□□ -1.65
RAE1P78406 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.77□□□□□ -1.65
RAE1P78406 AL590229.1-201ENST00000603497 542 ntBASIC4.77□□□□□ -1.65
RAE1P78406 AL627230.1-201ENST00000613077 211 ntBASIC4.77□□□□□ -1.65
RAE1P78406 AC122133.1-201ENST00000613964 233 ntBASIC4.77□□□□□ -1.65
RAE1P78406 AC022467.1-201ENST00000614738 749 ntBASIC4.77□□□□□ -1.65
RAE1P78406 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.77□□□□□ -1.65
RAE1P78406 AL591926.8-201ENST00000616876 211 ntBASIC4.77□□□□□ -1.65
RAE1P78406 AC015914.2-201ENST00000618167 288 ntBASIC4.77□□□□□ -1.65
RAE1P78406 AC069209.1-201ENST00000619282 651 ntBASIC4.77□□□□□ -1.65
RAE1P78406 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.77□□□□□ -1.65
RAE1P78406 AC073530.2-201ENST00000623987 261 ntBASIC4.77□□□□□ -1.65
RAE1P78406 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.77□□□□□ -1.65
RAE1P78406 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.77□□□□□ -1.65
RAE1P78406 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.77□□□□□ -1.65
RAE1P78406 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
RAE1P78406 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
RAE1P78406 OR9K1P-202ENST00000641111 3217 ntBASIC4.77□□□□□ -1.65
RAE1P78406 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RAE1P78406 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RAE1P78406 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RAE1P78406 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.77□□□□□ -1.65
RAE1P78406 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RAE1P78406 AL022393.1-201ENST00000625142 1677 ntBASIC4.77□□□□□ -1.65
RAE1P78406 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.76□□□□□ -1.65
RAE1P78406 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.76□□□□□ -1.65
RAE1P78406 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.76□□□□□ -1.65
RAE1P78406 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RAE1P78406 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RAE1P78406 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RAE1P78406 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RAE1P78406 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RAE1P78406 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RAE1P78406 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RAE1P78406 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RAE1P78406 Y_RNA.201-201ENST00000364052 96 ntBASIC4.76□□□□□ -1.65
RAE1P78406 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RAE1P78406 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.76□□□□□ -1.65
RAE1P78406 PEX12P1-201ENST00000400284 1048 ntBASIC4.76□□□□□ -1.65
RAE1P78406 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.76□□□□□ -1.65
RAE1P78406 AL450992.3-201ENST00000413192 568 ntBASIC4.76□□□□□ -1.65
RAE1P78406 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.76□□□□□ -1.65
RAE1P78406 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.76□□□□□ -1.65
RAE1P78406 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.76□□□□□ -1.65
RAE1P78406 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.76□□□□□ -1.65
RAE1P78406 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RAE1P78406 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.76□□□□□ -1.65
RAE1P78406 RHOT1P3-201ENST00000436571 331 ntBASIC4.76□□□□□ -1.65
RAE1P78406 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RAE1P78406 CNOT7P2-201ENST00000441051 832 ntBASIC4.76□□□□□ -1.65
RAE1P78406 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.76□□□□□ -1.65
RAE1P78406 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.76□□□□□ -1.65
RAE1P78406 AL354714.3-201ENST00000447284 493 ntBASIC4.76□□□□□ -1.65
RAE1P78406 TPMTP4-201ENST00000450749 678 ntBASIC4.76□□□□□ -1.65
RAE1P78406 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.76□□□□□ -1.65
RAE1P78406 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.76□□□□□ -1.65
RAE1P78406 RN7SL172P-201ENST00000460535 303 ntBASIC4.76□□□□□ -1.65
RAE1P78406 AC092754.2-201ENST00000463506 460 ntBASIC4.76□□□□□ -1.65
RAE1P78406 SYPL1P1-201ENST00000473622 768 ntBASIC4.76□□□□□ -1.65
RAE1P78406 AC079841.1-201ENST00000481228 950 ntBASIC4.76□□□□□ -1.65
RAE1P78406 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.76□□□□□ -1.65
RAE1P78406 SNRPCP2-201ENST00000504370 475 ntBASIC4.76□□□□□ -1.65
RAE1P78406 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RAE1P78406 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.76□□□□□ -1.65
RAE1P78406 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.76□□□□□ -1.65
RAE1P78406 MTCO1P49-201ENST00000523429 802 ntBASIC4.76□□□□□ -1.65
RAE1P78406 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.76□□□□□ -1.65
RAE1P78406 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RAE1P78406 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.76□□□□□ -1.65
RAE1P78406 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.76□□□□□ -1.65
RAE1P78406 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RAE1P78406 GTF2IP8-201ENST00000560687 584 ntBASIC4.76□□□□□ -1.65
RAE1P78406 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RAE1P78406 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.76□□□□□ -1.65
RAE1P78406 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.76□□□□□ -1.65
RAE1P78406 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.76□□□□□ -1.65
RAE1P78406 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.76□□□□□ -1.65
RAE1P78406 AC006539.2-201ENST00000601729 572 ntBASIC4.76□□□□□ -1.65
RAE1P78406 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.76□□□□□ -1.65
RAE1P78406 AL390816.3-201ENST00000604527 1066 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms