Protein–RNA interactions for Protein: P63316

TNNC1, Troponin C, slow skeletal and cardiac muscles, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNC1P63316 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TNNC1P63316 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TNNC1P63316 LINC02471-203ENST00000641941 4752 ntBASIC4.42□□□□□ -1.7
TNNC1P63316 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
TNNC1P63316 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TNNC1P63316 ENSAP1-201ENST00000392855 326 ntBASIC4.42□□□□□ -1.7
TNNC1P63316 AC136624.1-201ENST00000400791 413 ntBASIC4.42□□□□□ -1.7
TNNC1P63316 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.42□□□□□ -1.7
TNNC1P63316 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.42□□□□□ -1.7
TNNC1P63316 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.42□□□□□ -1.7
TNNC1P63316 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.42□□□□□ -1.7
TNNC1P63316 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.42□□□□□ -1.7
TNNC1P63316 HMGB1P16-201ENST00000447155 540 ntBASIC4.42□□□□□ -1.7
TNNC1P63316 AL133477.1-201ENST00000457472 514 ntBASIC4.42□□□□□ -1.7
TNNC1P63316 RPL7P1-201ENST00000468161 747 ntBASIC4.42□□□□□ -1.7
TNNC1P63316 RPL7P9-201ENST00000468715 747 ntBASIC4.42□□□□□ -1.7
TNNC1P63316 AC093824.1-201ENST00000508796 343 ntBASIC4.42□□□□□ -1.7
TNNC1P63316 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.42□□□□□ -1.7
TNNC1P63316 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.42□□□□□ -1.7
TNNC1P63316 PDCD5P1-201ENST00000543528 309 ntBASIC4.42□□□□□ -1.7
TNNC1P63316 AC107016.1-201ENST00000550463 337 ntBASIC4.42□□□□□ -1.7
TNNC1P63316 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.42□□□□□ -1.7
TNNC1P63316 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.42□□□□□ -1.7
TNNC1P63316 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.42□□□□□ -1.7
TNNC1P63316 AL360157.1-201ENST00000565962 87 ntBASIC4.42□□□□□ -1.7
TNNC1P63316 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.42□□□□□ -1.7
TNNC1P63316 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.42□□□□□ -1.7
TNNC1P63316 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.42□□□□□ -1.7
TNNC1P63316 SNX6P1-201ENST00000601728 1224 ntBASIC4.42□□□□□ -1.7
TNNC1P63316 AL451044.1-201ENST00000604867 238 ntBASIC4.42□□□□□ -1.7
TNNC1P63316 LINC00901.1-201ENST00000617252 152 ntBASIC4.42□□□□□ -1.7
TNNC1P63316 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.42□□□□□ -1.7
TNNC1P63316 AP005264.7-201ENST00000625003 745 ntBASIC4.42□□□□□ -1.7
TNNC1P63316 ERCC6-202ENST00000374127 1782 ntBASIC4.42□□□□□ -1.7
TNNC1P63316 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TNNC1P63316 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
TNNC1P63316 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
TNNC1P63316 AC017007.4-201ENST00000503353 1352 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TNNC1P63316 AC009313.2-201ENST00000417893 1941 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.41□□□□□ -1.7
TNNC1P63316 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.41□□□□□ -1.7
TNNC1P63316 SNORA60-201ENST00000362396 134 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 RNA5SP317-201ENST00000410176 116 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 RNA5SP311-201ENST00000411290 116 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.41□□□□□ -1.7
TNNC1P63316 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.41□□□□□ -1.7
TNNC1P63316 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.41□□□□□ -1.7
TNNC1P63316 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.41□□□□□ -1.7
TNNC1P63316 RPS27AP12-201ENST00000429552 465 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 RPS20P1-201ENST00000434853 354 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 ELOCP10-201ENST00000440624 327 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 AL357520.1-201ENST00000441557 453 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.41□□□□□ -1.7
TNNC1P63316 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.41□□□□□ -1.7
TNNC1P63316 AC093267.1-201ENST00000489176 961 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.41□□□□□ -1.7
TNNC1P63316 AC109458.1-201ENST00000508858 316 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 RNA5SP315-201ENST00000516340 116 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 RNA5SP312-201ENST00000517068 116 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 MIR2116-201ENST00000517221 80 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 DYNLL1P4-201ENST00000549314 266 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 AC068446.3-201ENST00000555285 382 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.41□□□□□ -1.7
TNNC1P63316 RPL23AP87-202ENST00000573039 466 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 MIR5684-201ENST00000585074 65 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 AC123786.2-201ENST00000603459 275 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 ELOCP34-201ENST00000604436 327 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 RNU4-89P-201ENST00000607443 133 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 AC090246.1-201ENST00000616499 426 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 MIR7151-201ENST00000617477 60 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.41□□□□□ -1.7
TNNC1P63316 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.41□□□□□ -1.7
TNNC1P63316 AC015722.2-201ENST00000622210 551 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 AC112484.5-201ENST00000624189 228 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.41□□□□□ -1.7
TNNC1P63316 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
TNNC1P63316 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TNNC1P63316 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.41□□□□□ -1.7
TNNC1P63316 USP9YP4-201ENST00000424401 1745 ntBASIC4.41□□□□□ -1.7
TNNC1P63316 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
TNNC1P63316 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.4□□□□□ -1.7
TNNC1P63316 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.4□□□□□ -1.71
TNNC1P63316 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
TNNC1P63316 OR52B1P-201ENST00000316506 909 ntBASIC4.4□□□□□ -1.71
TNNC1P63316 SNORD35B-201ENST00000363660 87 ntBASIC4.4□□□□□ -1.71
TNNC1P63316 RNA5SP130-201ENST00000364431 114 ntBASIC4.4□□□□□ -1.71
TNNC1P63316 RN7SKP227-201ENST00000364445 330 ntBASIC4.4□□□□□ -1.71
TNNC1P63316 SNORA37-201ENST00000384504 129 ntBASIC4.4□□□□□ -1.71
TNNC1P63316 RN7SKP56-201ENST00000410513 331 ntBASIC4.4□□□□□ -1.71
TNNC1P63316 HSPE1P12-201ENST00000412576 301 ntBASIC4.4□□□□□ -1.71
TNNC1P63316 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.4□□□□□ -1.71
TNNC1P63316 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.4□□□□□ -1.71
TNNC1P63316 RPL12P46-201ENST00000436610 195 ntBASIC4.4□□□□□ -1.71
TNNC1P63316 AL356535.1-201ENST00000440335 398 ntBASIC4.4□□□□□ -1.71
TNNC1P63316 RPS4XP4-201ENST00000443195 763 ntBASIC4.4□□□□□ -1.71
TNNC1P63316 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.4□□□□□ -1.71
TNNC1P63316 AC069277.2-201ENST00000454211 432 ntBASIC4.4□□□□□ -1.71
TNNC1P63316 AC068587.1-201ENST00000483613 781 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms