Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL138820.1-201ENST00000617901 5305 ntBASIC5.68□□□□□ -1.5
RHBDL3P58872 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RHBDL3P58872 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
RHBDL3P58872 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RHBDL3P58872 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
RHBDL3P58872 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RHBDL3P58872 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RHBDL3P58872 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.67□□□□□ -1.5
RHBDL3P58872 RNU5E-10P-201ENST00000363506 118 ntBASIC5.67□□□□□ -1.5
RHBDL3P58872 AC068538.1-201ENST00000376856 336 ntBASIC5.67□□□□□ -1.5
RHBDL3P58872 U3.22-201ENST00000391120 215 ntBASIC5.67□□□□□ -1.5
RHBDL3P58872 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.67□□□□□ -1.5
RHBDL3P58872 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.67□□□□□ -1.5
RHBDL3P58872 AC140479.3-201ENST00000418944 1126 ntBASIC5.67□□□□□ -1.5
RHBDL3P58872 AC092634.2-201ENST00000428146 1010 ntBASIC5.67□□□□□ -1.5
RHBDL3P58872 C4BPAP2-201ENST00000428434 478 ntBASIC5.67□□□□□ -1.5
RHBDL3P58872 CNOT7P1-201ENST00000429006 852 ntBASIC5.67□□□□□ -1.5
RHBDL3P58872 AC092162.1-201ENST00000432828 434 ntBASIC5.67□□□□□ -1.5
RHBDL3P58872 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.67□□□□□ -1.5
RHBDL3P58872 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.67□□□□□ -1.5
RHBDL3P58872 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.67□□□□□ -1.5
RHBDL3P58872 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.67□□□□□ -1.5
RHBDL3P58872 AC079168.2-201ENST00000453977 416 ntBASIC5.67□□□□□ -1.5
RHBDL3P58872 AC021660.1-201ENST00000465006 554 ntBASIC5.67□□□□□ -1.5
RHBDL3P58872 AL049874.2-201ENST00000492636 288 ntBASIC5.67□□□□□ -1.5
RHBDL3P58872 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.67□□□□□ -1.5
RHBDL3P58872 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.67□□□□□ -1.5
RHBDL3P58872 MYL12BP2-201ENST00000503948 512 ntBASIC5.67□□□□□ -1.5
RHBDL3P58872 snoZ278.1-201ENST00000517059 112 ntBASIC5.67□□□□□ -1.5
RHBDL3P58872 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.67□□□□□ -1.5
RHBDL3P58872 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.67□□□□□ -1.5
RHBDL3P58872 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.67□□□□□ -1.5
RHBDL3P58872 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.67□□□□□ -1.5
RHBDL3P58872 RN7SL652P-201ENST00000577769 300 ntBASIC5.67□□□□□ -1.5
RHBDL3P58872 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RHBDL3P58872 AP005119.2-201ENST00000579735 1105 ntBASIC5.67□□□□□ -1.5
RHBDL3P58872 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.67□□□□□ -1.5
RHBDL3P58872 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.67□□□□□ -1.5
RHBDL3P58872 AL359535.1-201ENST00000612100 1087 ntBASIC5.67□□□□□ -1.5
RHBDL3P58872 AC105227.2-201ENST00000615075 605 ntBASIC5.67□□□□□ -1.5
RHBDL3P58872 BX005214.3-202ENST00000619809 325 ntBASIC5.67□□□□□ -1.5
RHBDL3P58872 MIR6758-201ENST00000620653 63 ntBASIC5.67□□□□□ -1.5
RHBDL3P58872 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.67□□□□□ -1.5
RHBDL3P58872 AC099654.8-201ENST00000637757 681 ntBASIC5.67□□□□□ -1.5
RHBDL3P58872 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
RHBDL3P58872 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.67□□□□□ -1.5
RHBDL3P58872 AC120338.1-201ENST00000625074 1541 ntBASIC5.67□□□□□ -1.5
RHBDL3P58872 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.67□□□□□ -1.5
RHBDL3P58872 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
RHBDL3P58872 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RHBDL3P58872 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.67□□□□□ -1.5
RHBDL3P58872 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.66□□□□□ -1.5
RHBDL3P58872 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RHBDL3P58872 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.66□□□□□ -1.5
RHBDL3P58872 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RHBDL3P58872 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RHBDL3P58872 AC025574.1-201ENST00000554784 1653 ntBASIC5.66□□□□□ -1.5
RHBDL3P58872 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
RHBDL3P58872 AC083843.3-201ENST00000623679 2186 ntBASIC5.66□□□□□ -1.5
RHBDL3P58872 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.66□□□□□ -1.5
RHBDL3P58872 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.66□□□□□ -1.5
RHBDL3P58872 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RHBDL3P58872 FAM3C2-201ENST00000312214 681 ntBASIC5.66□□□□□ -1.5
RHBDL3P58872 ELOCP19-201ENST00000411919 318 ntBASIC5.66□□□□□ -1.5
RHBDL3P58872 MTND4P3-201ENST00000417829 541 ntBASIC5.66□□□□□ -1.5
RHBDL3P58872 AC009480.2-201ENST00000422916 432 ntBASIC5.66□□□□□ -1.5
RHBDL3P58872 AL732292.1-201ENST00000426692 226 ntBASIC5.66□□□□□ -1.5
RHBDL3P58872 AL451139.1-201ENST00000434718 346 ntBASIC5.66□□□□□ -1.5
RHBDL3P58872 RPL21P133-201ENST00000443666 476 ntBASIC5.66□□□□□ -1.5
RHBDL3P58872 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.66□□□□□ -1.5
RHBDL3P58872 HMGN3P1-201ENST00000453847 193 ntBASIC5.66□□□□□ -1.5
RHBDL3P58872 snoU109.3-201ENST00000459477 145 ntBASIC5.66□□□□□ -1.5
RHBDL3P58872 NDUFA5P9-201ENST00000472609 340 ntBASIC5.66□□□□□ -1.5
RHBDL3P58872 AC079203.1-201ENST00000487972 404 ntBASIC5.66□□□□□ -1.5
RHBDL3P58872 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.66□□□□□ -1.5
RHBDL3P58872 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.66□□□□□ -1.5
RHBDL3P58872 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.66□□□□□ -1.5
RHBDL3P58872 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.66□□□□□ -1.5
RHBDL3P58872 RNU6-276P-201ENST00000516114 96 ntBASIC5.66□□□□□ -1.5
RHBDL3P58872 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.66□□□□□ -1.5
RHBDL3P58872 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.66□□□□□ -1.5
RHBDL3P58872 AC005868.1-201ENST00000536421 331 ntBASIC5.66□□□□□ -1.5
RHBDL3P58872 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.66□□□□□ -1.5
RHBDL3P58872 AC068831.4-201ENST00000556118 109 ntBASIC5.66□□□□□ -1.5
RHBDL3P58872 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.66□□□□□ -1.5
RHBDL3P58872 MIR4697-201ENST00000582977 78 ntBASIC5.66□□□□□ -1.5
RHBDL3P58872 BNIP3P39-201ENST00000601077 554 ntBASIC5.66□□□□□ -1.5
RHBDL3P58872 AL022067.1-201ENST00000602426 454 ntBASIC5.66□□□□□ -1.5
RHBDL3P58872 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.66□□□□□ -1.5
RHBDL3P58872 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.66□□□□□ -1.5
RHBDL3P58872 VN1R7P-201ENST00000619242 903 ntBASIC5.66□□□□□ -1.5
RHBDL3P58872 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.66□□□□□ -1.5
RHBDL3P58872 AC009951.1-201ENST00000623674 2614 ntBASIC5.66□□□□□ -1.5
RHBDL3P58872 AL645568.2-201ENST00000432815 1337 ntBASIC5.66□□□□□ -1.5
RHBDL3P58872 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.66□□□□□ -1.5
RHBDL3P58872 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.66□□□□□ -1.5
RHBDL3P58872 AC002525.1-201ENST00000624392 1622 ntBASIC5.66□□□□□ -1.5
RHBDL3P58872 AC111188.2-201ENST00000529697 1387 ntBASIC5.66□□□□□ -1.5
RHBDL3P58872 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
RHBDL3P58872 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms