Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH11P55287 OR10J6P-201ENST00000289731 930 ntBASIC4.29□□□□□ -1.72
CDH11P55287 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CDH11P55287 RNU1-20P-201ENST00000363314 162 ntBASIC4.29□□□□□ -1.72
CDH11P55287 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CDH11P55287 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
CDH11P55287 RNA5SP372-201ENST00000390836 115 ntBASIC4.29□□□□□ -1.72
CDH11P55287 MIR921-201ENST00000401133 56 ntBASIC4.29□□□□□ -1.72
CDH11P55287 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH11P55287 Y_RNA.625-201ENST00000411256 107 ntBASIC4.29□□□□□ -1.72
CDH11P55287 VDAC1P9-201ENST00000412766 841 ntBASIC4.29□□□□□ -1.72
CDH11P55287 RPL21P108-201ENST00000413857 481 ntBASIC4.29□□□□□ -1.72
CDH11P55287 CYCSP10-201ENST00000417973 294 ntBASIC4.29□□□□□ -1.72
CDH11P55287 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH11P55287 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.29□□□□□ -1.72
CDH11P55287 AC004448.2-201ENST00000422360 586 ntBASIC4.29□□□□□ -1.72
CDH11P55287 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDH11P55287 Z74021.1-201ENST00000423610 407 ntBASIC4.29□□□□□ -1.72
CDH11P55287 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH11P55287 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH11P55287 RPS17P8-201ENST00000434525 335 ntBASIC4.29□□□□□ -1.72
CDH11P55287 AC093414.1-201ENST00000434712 514 ntBASIC4.29□□□□□ -1.72
CDH11P55287 PTGES3P1-201ENST00000439531 483 ntBASIC4.29□□□□□ -1.72
CDH11P55287 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.29□□□□□ -1.72
CDH11P55287 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH11P55287 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CDH11P55287 OR1H1P-201ENST00000448731 937 ntBASIC4.29□□□□□ -1.72
CDH11P55287 SLC25A18P1-201ENST00000449385 454 ntBASIC4.29□□□□□ -1.72
CDH11P55287 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH11P55287 CDC42P1-201ENST00000456658 548 ntBASIC4.29□□□□□ -1.72
CDH11P55287 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH11P55287 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDH11P55287 GAPDHP56-201ENST00000506031 988 ntBASIC4.29□□□□□ -1.72
CDH11P55287 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.29□□□□□ -1.72
CDH11P55287 OR7H2P-201ENST00000513483 306 ntBASIC4.29□□□□□ -1.72
CDH11P55287 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH11P55287 AC063949.1-201ENST00000552900 865 ntBASIC4.29□□□□□ -1.72
CDH11P55287 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH11P55287 AC093249.4-201ENST00000564755 259 ntBASIC4.29□□□□□ -1.72
CDH11P55287 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH11P55287 MIR4737-201ENST00000583979 81 ntBASIC4.29□□□□□ -1.72
CDH11P55287 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH11P55287 AC096553.1-201ENST00000605169 829 ntBASIC4.29□□□□□ -1.72
CDH11P55287 AC112220.2-201ENST00000605513 533 ntBASIC4.29□□□□□ -1.72
CDH11P55287 AL121932.1-201ENST00000605542 214 ntBASIC4.29□□□□□ -1.72
CDH11P55287 AC106052.1-201ENST00000608029 497 ntBASIC4.29□□□□□ -1.72
CDH11P55287 AP001521.2-201ENST00000608772 546 ntBASIC4.29□□□□□ -1.72
CDH11P55287 AC068787.1-201ENST00000623908 691 ntBASIC4.29□□□□□ -1.72
CDH11P55287 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH11P55287 AL121594.5-201ENST00000631724 573 ntBASIC4.29□□□□□ -1.72
CDH11P55287 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH11P55287 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.29□□□□□ -1.72
CDH11P55287 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CDH11P55287 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH11P55287 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH11P55287 SAMMSON-226ENST00000642089 1582 ntBASIC4.28□□□□□ -1.72
CDH11P55287 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH11P55287 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH11P55287 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH11P55287 SMG1P6-201ENST00000532337 2930 ntBASIC4.28□□□□□ -1.72
CDH11P55287 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH11P55287 IGKV7-3-201ENST00000357453 298 ntBASIC4.28□□□□□ -1.72
CDH11P55287 ATP5F1P2-201ENST00000398143 760 ntBASIC4.28□□□□□ -1.72
CDH11P55287 DNAJC19P6-201ENST00000401853 280 ntBASIC4.28□□□□□ -1.72
CDH11P55287 HDGFP1-201ENST00000405943 252 ntBASIC4.28□□□□□ -1.72
CDH11P55287 RPS3AP25-201ENST00000411660 793 ntBASIC4.28□□□□□ -1.72
CDH11P55287 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH11P55287 AC004690.1-201ENST00000418216 328 ntBASIC4.28□□□□□ -1.72
CDH11P55287 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH11P55287 AC246680.2-201ENST00000422106 389 ntBASIC4.28□□□□□ -1.72
CDH11P55287 RPL7P57-201ENST00000423238 740 ntBASIC4.28□□□□□ -1.72
CDH11P55287 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
CDH11P55287 MTND2P5-201ENST00000432656 1006 ntBASIC4.28□□□□□ -1.72
CDH11P55287 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH11P55287 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH11P55287 EIF2S2P2-201ENST00000447161 982 ntBASIC4.28□□□□□ -1.72
CDH11P55287 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH11P55287 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.28□□□□□ -1.72
CDH11P55287 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDH11P55287 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH11P55287 RNU7-140P-201ENST00000459546 60 ntBASIC4.28□□□□□ -1.72
CDH11P55287 RN7SL41P-201ENST00000476144 297 ntBASIC4.28□□□□□ -1.72
CDH11P55287 RN7SL817P-201ENST00000480777 288 ntBASIC4.28□□□□□ -1.72
CDH11P55287 RPS3AP6-201ENST00000484430 795 ntBASIC4.28□□□□□ -1.72
CDH11P55287 AC093720.1-201ENST00000505681 714 ntBASIC4.28□□□□□ -1.72
CDH11P55287 MRPS33P2-201ENST00000507850 322 ntBASIC4.28□□□□□ -1.72
CDH11P55287 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH11P55287 AC008565.1-201ENST00000509046 885 ntBASIC4.28□□□□□ -1.72
CDH11P55287 AC119751.1-201ENST00000513357 765 ntBASIC4.28□□□□□ -1.72
CDH11P55287 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.28□□□□□ -1.72
CDH11P55287 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.28□□□□□ -1.72
CDH11P55287 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH11P55287 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH11P55287 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.28□□□□□ -1.72
CDH11P55287 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
CDH11P55287 AC137768.1-201ENST00000549998 553 ntBASIC4.28□□□□□ -1.72
CDH11P55287 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH11P55287 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.28□□□□□ -1.72
CDH11P55287 UBE2FP2-201ENST00000566646 462 ntBASIC4.28□□□□□ -1.72
CDH11P55287 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms