Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.44□□□□□ -1.54
CLTCL1P53675 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLTCL1P53675 OR6K3-202ENST00000368146 996 ntBASIC5.44□□□□□ -1.54
CLTCL1P53675 MIR491-201ENST00000384877 84 ntBASIC5.44□□□□□ -1.54
CLTCL1P53675 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.44□□□□□ -1.54
CLTCL1P53675 PDSS1P2-201ENST00000449397 678 ntBASIC5.44□□□□□ -1.54
CLTCL1P53675 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.44□□□□□ -1.54
CLTCL1P53675 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CLTCL1P53675 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.44□□□□□ -1.54
CLTCL1P53675 RNA5SP164-201ENST00000516533 110 ntBASIC5.44□□□□□ -1.54
CLTCL1P53675 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.44□□□□□ -1.54
CLTCL1P53675 MIR3200-201ENST00000580767 85 ntBASIC5.44□□□□□ -1.54
CLTCL1P53675 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLTCL1P53675 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.43□□□□□ -1.54
CLTCL1P53675 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CLTCL1P53675 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
CLTCL1P53675 SNORD9-201ENST00000362566 104 ntBASIC5.43□□□□□ -1.54
CLTCL1P53675 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLTCL1P53675 RPS29P4-201ENST00000414733 161 ntBASIC5.43□□□□□ -1.54
CLTCL1P53675 AL035423.1-201ENST00000420331 213 ntBASIC5.43□□□□□ -1.54
CLTCL1P53675 AC073387.1-201ENST00000453261 709 ntBASIC5.43□□□□□ -1.54
CLTCL1P53675 AC017037.1-201ENST00000508460 471 ntBASIC5.43□□□□□ -1.54
CLTCL1P53675 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLTCL1P53675 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.43□□□□□ -1.54
CLTCL1P53675 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.43□□□□□ -1.54
CLTCL1P53675 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.43□□□□□ -1.54
CLTCL1P53675 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.43□□□□□ -1.54
CLTCL1P53675 MIR7975-201ENST00000619350 68 ntBASIC5.43□□□□□ -1.54
CLTCL1P53675 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CLTCL1P53675 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CLTCL1P53675 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLTCL1P53675 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLTCL1P53675 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.43□□□□□ -1.54
CLTCL1P53675 AC032011.1-201ENST00000611703 1549 ntBASIC5.43□□□□□ -1.54
CLTCL1P53675 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLTCL1P53675 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLTCL1P53675 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.42□□□□□ -1.54
CLTCL1P53675 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLTCL1P53675 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.42□□□□□ -1.54
CLTCL1P53675 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.42□□□□□ -1.54
CLTCL1P53675 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CLTCL1P53675 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLTCL1P53675 AC007068.1-201ENST00000396690 844 ntBASIC5.42□□□□□ -1.54
CLTCL1P53675 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.42□□□□□ -1.54
CLTCL1P53675 VN1R25P-201ENST00000443385 738 ntBASIC5.42□□□□□ -1.54
CLTCL1P53675 RPL21P23-201ENST00000446654 460 ntBASIC5.42□□□□□ -1.54
CLTCL1P53675 VN1R40P-201ENST00000455196 941 ntBASIC5.42□□□□□ -1.54
CLTCL1P53675 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.42□□□□□ -1.54
CLTCL1P53675 RPL21P6-201ENST00000479171 504 ntBASIC5.42□□□□□ -1.54
CLTCL1P53675 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.42□□□□□ -1.54
CLTCL1P53675 STMN1P2-201ENST00000508435 439 ntBASIC5.42□□□□□ -1.54
CLTCL1P53675 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.42□□□□□ -1.54
CLTCL1P53675 AC074250.1-201ENST00000511117 192 ntBASIC5.42□□□□□ -1.54
CLTCL1P53675 OR4A12P-201ENST00000530847 918 ntBASIC5.42□□□□□ -1.54
CLTCL1P53675 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.42□□□□□ -1.54
CLTCL1P53675 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.42□□□□□ -1.54
CLTCL1P53675 AC243312.2-201ENST00000623340 601 ntBASIC5.42□□□□□ -1.54
CLTCL1P53675 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLTCL1P53675 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CLTCL1P53675 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
CLTCL1P53675 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.42□□□□□ -1.54
CLTCL1P53675 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CLTCL1P53675 UBE3AP2-201ENST00000429033 2259 ntBASIC5.42□□□□□ -1.54
CLTCL1P53675 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC5.42□□□□□ -1.54
CLTCL1P53675 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.41□□□□□ -1.54
CLTCL1P53675 DPPA2P2-201ENST00000418220 897 ntBASIC5.41□□□□□ -1.54
CLTCL1P53675 DBIP2-201ENST00000419076 262 ntBASIC5.41□□□□□ -1.54
CLTCL1P53675 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.41□□□□□ -1.54
CLTCL1P53675 AC115115.1-201ENST00000449927 248 ntBASIC5.41□□□□□ -1.54
CLTCL1P53675 AC007967.1-201ENST00000455422 1159 ntBASIC5.41□□□□□ -1.54
CLTCL1P53675 snoU13.24-201ENST00000458998 104 ntBASIC5.41□□□□□ -1.54
CLTCL1P53675 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.41□□□□□ -1.54
CLTCL1P53675 AL159169.3-201ENST00000608871 561 ntBASIC5.41□□□□□ -1.54
CLTCL1P53675 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.41□□□□□ -1.54
CLTCL1P53675 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.41□□□□□ -1.54
CLTCL1P53675 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLTCL1P53675 AL121839.2-201ENST00000565058 6943 ntBASIC5.41□□□□□ -1.54
CLTCL1P53675 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.41□□□□□ -1.54
CLTCL1P53675 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CLTCL1P53675 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLTCL1P53675 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLTCL1P53675 PRO1804-201ENST00000623780 2050 ntBASIC5.41□□□□□ -1.54
CLTCL1P53675 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CLTCL1P53675 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CLTCL1P53675 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC5.41□□□□□ -1.54
CLTCL1P53675 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.41□□□□□ -1.54
CLTCL1P53675 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.41□□□□□ -1.54
CLTCL1P53675 AC092447.2-201ENST00000435487 669 ntBASIC5.41□□□□□ -1.54
CLTCL1P53675 SNORA71B-202ENST00000439232 272 ntBASIC5.41□□□□□ -1.54
CLTCL1P53675 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.41□□□□□ -1.54
CLTCL1P53675 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.41□□□□□ -1.54
CLTCL1P53675 AC104978.1-201ENST00000449387 391 ntBASIC5.41□□□□□ -1.54
CLTCL1P53675 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.41□□□□□ -1.54
CLTCL1P53675 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.41□□□□□ -1.54
CLTCL1P53675 WBP1LP4-201ENST00000505043 344 ntBASIC5.41□□□□□ -1.54
CLTCL1P53675 HSPD1P15-201ENST00000505573 1122 ntBASIC5.41□□□□□ -1.54
CLTCL1P53675 AL390816.3-201ENST00000604527 1066 ntBASIC5.41□□□□□ -1.54
CLTCL1P53675 AP000553.6-201ENST00000641242 118 ntBASIC5.41□□□□□ -1.54
CLTCL1P53675 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.41□□□□□ -1.54
CLTCL1P53675 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms