Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 FTH1P16-201ENST00000435241 552 ntBASIC4.71□□□□□ -1.66
LIMK1P53667 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.71□□□□□ -1.66
LIMK1P53667 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.71□□□□□ -1.66
LIMK1P53667 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
LIMK1P53667 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LIMK1P53667 AC004980.3-201ENST00000447046 365 ntBASIC4.71□□□□□ -1.66
LIMK1P53667 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LIMK1P53667 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.71□□□□□ -1.66
LIMK1P53667 RPL7P19-201ENST00000469948 618 ntBASIC4.71□□□□□ -1.66
LIMK1P53667 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.71□□□□□ -1.66
LIMK1P53667 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
LIMK1P53667 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.71□□□□□ -1.66
LIMK1P53667 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.71□□□□□ -1.66
LIMK1P53667 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.71□□□□□ -1.66
LIMK1P53667 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
LIMK1P53667 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.71□□□□□ -1.66
LIMK1P53667 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.71□□□□□ -1.66
LIMK1P53667 AC006130.2-201ENST00000586202 326 ntBASIC4.71□□□□□ -1.66
LIMK1P53667 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.71□□□□□ -1.66
LIMK1P53667 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.71□□□□□ -1.66
LIMK1P53667 AC010424.2-201ENST00000607594 443 ntBASIC4.71□□□□□ -1.66
LIMK1P53667 AC016542.1-201ENST00000608259 493 ntBASIC4.71□□□□□ -1.66
LIMK1P53667 AC245100.7-201ENST00000609678 442 ntBASIC4.71□□□□□ -1.66
LIMK1P53667 MIR8069-1-201ENST00000616627 86 ntBASIC4.71□□□□□ -1.66
LIMK1P53667 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
LIMK1P53667 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.71□□□□□ -1.66
LIMK1P53667 MIR8069-2-201ENST00000621412 86 ntBASIC4.71□□□□□ -1.66
LIMK1P53667 AC067931.1-201ENST00000624190 671 ntBASIC4.71□□□□□ -1.66
LIMK1P53667 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.71□□□□□ -1.66
LIMK1P53667 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
LIMK1P53667 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.71□□□□□ -1.66
LIMK1P53667 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LIMK1P53667 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.71□□□□□ -1.66
LIMK1P53667 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.71□□□□□ -1.66
LIMK1P53667 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LIMK1P53667 A2MP1-204ENST00000566278 4130 ntBASIC4.71□□□□□ -1.66
LIMK1P53667 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
LIMK1P53667 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LIMK1P53667 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
LIMK1P53667 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LIMK1P53667 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LIMK1P53667 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.71□□□□□ -1.66
LIMK1P53667 MAPK10-286ENST00000641208 8747 ntBASIC4.7□□□□□ -1.66
LIMK1P53667 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.7□□□□□ -1.66
LIMK1P53667 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
LIMK1P53667 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.7□□□□□ -1.66
LIMK1P53667 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.7□□□□□ -1.66
LIMK1P53667 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.7□□□□□ -1.66
LIMK1P53667 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.7□□□□□ -1.66
LIMK1P53667 USP9YP4-201ENST00000424401 1745 ntBASIC4.7□□□□□ -1.66
LIMK1P53667 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.7□□□□□ -1.66
LIMK1P53667 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
LIMK1P53667 RN7SKP280-201ENST00000364196 304 ntBASIC4.7□□□□□ -1.66
LIMK1P53667 SNORA70.10-201ENST00000384515 134 ntBASIC4.7□□□□□ -1.66
LIMK1P53667 TMBIM7P-201ENST00000418074 855 ntBASIC4.7□□□□□ -1.66
LIMK1P53667 AC023128.2-201ENST00000420880 1223 ntBASIC4.7□□□□□ -1.66
LIMK1P53667 COX6CP13-201ENST00000428703 226 ntBASIC4.7□□□□□ -1.66
LIMK1P53667 MRPL35P2-201ENST00000448009 511 ntBASIC4.7□□□□□ -1.66
LIMK1P53667 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.7□□□□□ -1.66
LIMK1P53667 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LIMK1P53667 OR5H3P-201ENST00000502817 919 ntBASIC4.7□□□□□ -1.66
LIMK1P53667 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.7□□□□□ -1.66
LIMK1P53667 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.7□□□□□ -1.66
LIMK1P53667 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LIMK1P53667 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.7□□□□□ -1.66
LIMK1P53667 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.7□□□□□ -1.66
LIMK1P53667 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.7□□□□□ -1.66
LIMK1P53667 AC053481.3-201ENST00000577881 843 ntBASIC4.7□□□□□ -1.66
LIMK1P53667 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.7□□□□□ -1.66
LIMK1P53667 AC090948.1-201ENST00000607464 549 ntBASIC4.7□□□□□ -1.66
LIMK1P53667 AL445567.2-201ENST00000618935 498 ntBASIC4.7□□□□□ -1.66
LIMK1P53667 AP005019.3-201ENST00000620418 560 ntBASIC4.7□□□□□ -1.66
LIMK1P53667 AL138960.2-201ENST00000625145 535 ntBASIC4.7□□□□□ -1.66
LIMK1P53667 AC083865.1-201ENST00000636634 831 ntBASIC4.7□□□□□ -1.66
LIMK1P53667 SALL4P2-201ENST00000423288 2910 ntBASIC4.7□□□□□ -1.66
LIMK1P53667 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LIMK1P53667 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
LIMK1P53667 RAD17P1-201ENST00000418130 2042 ntBASIC4.7□□□□□ -1.66
LIMK1P53667 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
LIMK1P53667 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.7□□□□□ -1.66
LIMK1P53667 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LIMK1P53667 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
LIMK1P53667 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.7□□□□□ -1.66
LIMK1P53667 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
LIMK1P53667 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LIMK1P53667 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LIMK1P53667 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
LIMK1P53667 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LIMK1P53667 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LIMK1P53667 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LIMK1P53667 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.69□□□□□ -1.66
LIMK1P53667 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.69□□□□□ -1.66
LIMK1P53667 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LIMK1P53667 RNU1-87P-201ENST00000363727 170 ntBASIC4.69□□□□□ -1.66
LIMK1P53667 GCNT6-201ENST00000379591 934 ntBASIC4.69□□□□□ -1.66
LIMK1P53667 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.69□□□□□ -1.66
LIMK1P53667 VTA1P1-201ENST00000414044 866 ntBASIC4.69□□□□□ -1.66
LIMK1P53667 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.69□□□□□ -1.66
LIMK1P53667 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.69□□□□□ -1.66
LIMK1P53667 CEACAMP1-201ENST00000434624 1035 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms