Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.18□□□□□ -1.58
COPB1P53618 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.18□□□□□ -1.58
COPB1P53618 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.18□□□□□ -1.58
COPB1P53618 MIR3691-201ENST00000578066 90 ntBASIC5.18□□□□□ -1.58
COPB1P53618 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.18□□□□□ -1.58
COPB1P53618 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COPB1P53618 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COPB1P53618 AC010620.1-201ENST00000601088 1102 ntBASIC5.18□□□□□ -1.58
COPB1P53618 AC104785.1-201ENST00000603220 588 ntBASIC5.18□□□□□ -1.58
COPB1P53618 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.18□□□□□ -1.58
COPB1P53618 AL358072.1-201ENST00000604156 575 ntBASIC5.18□□□□□ -1.58
COPB1P53618 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COPB1P53618 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.18□□□□□ -1.58
COPB1P53618 MIR6748-201ENST00000610433 71 ntBASIC5.18□□□□□ -1.58
COPB1P53618 uc_338.18-201ENST00000615451 175 ntBASIC5.18□□□□□ -1.58
COPB1P53618 AC009090.3-201ENST00000616553 565 ntBASIC5.18□□□□□ -1.58
COPB1P53618 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.18□□□□□ -1.58
COPB1P53618 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.18□□□□□ -1.58
COPB1P53618 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COPB1P53618 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.18□□□□□ -1.58
COPB1P53618 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COPB1P53618 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COPB1P53618 MTND4P10-201ENST00000446199 1363 ntBASIC5.17□□□□□ -1.58
COPB1P53618 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.17□□□□□ -1.58
COPB1P53618 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COPB1P53618 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COPB1P53618 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
COPB1P53618 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COPB1P53618 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.17□□□□□ -1.58
COPB1P53618 RNA5SP305-201ENST00000362665 119 ntBASIC5.17□□□□□ -1.58
COPB1P53618 U8.4-201ENST00000363626 134 ntBASIC5.17□□□□□ -1.58
COPB1P53618 Y_RNA.169-201ENST00000363745 96 ntBASIC5.17□□□□□ -1.58
COPB1P53618 RNU4-31P-201ENST00000384211 141 ntBASIC5.17□□□□□ -1.58
COPB1P53618 RNU1-82P-201ENST00000390851 165 ntBASIC5.17□□□□□ -1.58
COPB1P53618 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.17□□□□□ -1.58
COPB1P53618 HMGB3P7-201ENST00000400214 611 ntBASIC5.17□□□□□ -1.58
COPB1P53618 MIR921-201ENST00000401133 56 ntBASIC5.17□□□□□ -1.58
COPB1P53618 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.17□□□□□ -1.58
COPB1P53618 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.17□□□□□ -1.58
COPB1P53618 GTF2IP2-201ENST00000424290 697 ntBASIC5.17□□□□□ -1.58
COPB1P53618 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.17□□□□□ -1.58
COPB1P53618 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.17□□□□□ -1.58
COPB1P53618 PPIAP13-201ENST00000434706 478 ntBASIC5.17□□□□□ -1.58
COPB1P53618 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.17□□□□□ -1.58
COPB1P53618 AC006466.1-201ENST00000438721 289 ntBASIC5.17□□□□□ -1.58
COPB1P53618 PTENP1-201ENST00000447117 1215 ntBASIC5.17□□□□□ -1.58
COPB1P53618 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.17□□□□□ -1.58
COPB1P53618 AC092685.1-201ENST00000447960 1243 ntBASIC5.17□□□□□ -1.58
COPB1P53618 SLC25A18P1-201ENST00000449385 454 ntBASIC5.17□□□□□ -1.58
COPB1P53618 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.17□□□□□ -1.58
COPB1P53618 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
COPB1P53618 RNU7-140P-201ENST00000459546 60 ntBASIC5.17□□□□□ -1.58
COPB1P53618 RPL23AP44-201ENST00000482216 473 ntBASIC5.17□□□□□ -1.58
COPB1P53618 BET1P1-201ENST00000482276 359 ntBASIC5.17□□□□□ -1.58
COPB1P53618 RN7SL591P-201ENST00000496150 292 ntBASIC5.17□□□□□ -1.58
COPB1P53618 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.17□□□□□ -1.58
COPB1P53618 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.17□□□□□ -1.58
COPB1P53618 NDUFB5P1-201ENST00000508134 564 ntBASIC5.17□□□□□ -1.58
COPB1P53618 AC091868.1-201ENST00000508746 304 ntBASIC5.17□□□□□ -1.58
COPB1P53618 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.17□□□□□ -1.58
COPB1P53618 SNORA3.4-201ENST00000515969 96 ntBASIC5.17□□□□□ -1.58
COPB1P53618 RNU6-1004P-201ENST00000516584 111 ntBASIC5.17□□□□□ -1.58
COPB1P53618 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.17□□□□□ -1.58
COPB1P53618 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.17□□□□□ -1.58
COPB1P53618 SETP1-201ENST00000556014 845 ntBASIC5.17□□□□□ -1.58
COPB1P53618 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.17□□□□□ -1.58
COPB1P53618 AC090695.1-201ENST00000561269 1222 ntBASIC5.17□□□□□ -1.58
COPB1P53618 ATP5J2P6-201ENST00000565203 266 ntBASIC5.17□□□□□ -1.58
COPB1P53618 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.17□□□□□ -1.58
COPB1P53618 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.17□□□□□ -1.58
COPB1P53618 AL445222.1-201ENST00000607259 628 ntBASIC5.17□□□□□ -1.58
COPB1P53618 AL360219.1-201ENST00000610230 366 ntBASIC5.17□□□□□ -1.58
COPB1P53618 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COPB1P53618 AL158062.1-201ENST00000619632 745 ntBASIC5.17□□□□□ -1.58
COPB1P53618 AC074140.1-201ENST00000621617 208 ntBASIC5.17□□□□□ -1.58
COPB1P53618 OR1S1-201ENST00000624470 978 ntBASIC5.17□□□□□ -1.58
COPB1P53618 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.17□□□□□ -1.58
COPB1P53618 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COPB1P53618 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.17□□□□□ -1.58
COPB1P53618 AL031119.1-201ENST00000404707 1879 ntBASIC5.17□□□□□ -1.58
COPB1P53618 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COPB1P53618 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COPB1P53618 AL513185.3-201ENST00000433335 1300 ntBASIC5.17□□□□□ -1.58
COPB1P53618 AL136164.3-201ENST00000624429 3978 ntBASIC5.17□□□□□ -1.58
COPB1P53618 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
COPB1P53618 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.17□□□□□ -1.58
COPB1P53618 HSPA8P18-201ENST00000439846 1928 ntBASIC5.17□□□□□ -1.58
COPB1P53618 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.17□□□□□ -1.58
COPB1P53618 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
COPB1P53618 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.16□□□□□ -1.58
COPB1P53618 AC104454.1-201ENST00000421341 1401 ntBASIC5.16□□□□□ -1.58
COPB1P53618 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
COPB1P53618 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.16□□□□□ -1.58
COPB1P53618 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COPB1P53618 MAPK10-303ENST00000641324 3959 ntBASIC5.16□□□□□ -1.58
COPB1P53618 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
COPB1P53618 AP001273.1-201ENST00000624493 3152 ntBASIC5.16□□□□□ -1.58
COPB1P53618 RN7SKP95-201ENST00000362860 303 ntBASIC5.16□□□□□ -1.58
COPB1P53618 RNU6-353P-201ENST00000364266 108 ntBASIC5.16□□□□□ -1.58
COPB1P53618 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms