Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.56□□□□□ -1.68
SOX2P48431 AC005912.1-201ENST00000495392 255 ntBASIC4.56□□□□□ -1.68
SOX2P48431 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
SOX2P48431 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.56□□□□□ -1.68
SOX2P48431 DSTNP2-201ENST00000504533 515 ntBASIC4.56□□□□□ -1.68
SOX2P48431 MTCO3P7-201ENST00000510008 774 ntBASIC4.56□□□□□ -1.68
SOX2P48431 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
SOX2P48431 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.56□□□□□ -1.68
SOX2P48431 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.56□□□□□ -1.68
SOX2P48431 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.56□□□□□ -1.68
SOX2P48431 AP003033.1-201ENST00000527244 415 ntBASIC4.56□□□□□ -1.68
SOX2P48431 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SOX2P48431 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.56□□□□□ -1.68
SOX2P48431 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SOX2P48431 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.56□□□□□ -1.68
SOX2P48431 AC119751.7-201ENST00000600494 245 ntBASIC4.56□□□□□ -1.68
SOX2P48431 AC064872.1-201ENST00000604823 1072 ntBASIC4.56□□□□□ -1.68
SOX2P48431 AC018714.1-201ENST00000605028 208 ntBASIC4.56□□□□□ -1.68
SOX2P48431 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.56□□□□□ -1.68
SOX2P48431 AC092653.1-201ENST00000608509 531 ntBASIC4.56□□□□□ -1.68
SOX2P48431 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.56□□□□□ -1.68
SOX2P48431 AC008443.7-201ENST00000622195 246 ntBASIC4.56□□□□□ -1.68
SOX2P48431 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.56□□□□□ -1.68
SOX2P48431 AC073869.10-201ENST00000642016 354 ntBASIC4.56□□□□□ -1.68
SOX2P48431 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SOX2P48431 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
SOX2P48431 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SOX2P48431 AC006210.2-201ENST00000367074 1545 ntBASIC4.56□□□□□ -1.68
SOX2P48431 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SOX2P48431 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.56□□□□□ -1.68
SOX2P48431 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SOX2P48431 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SOX2P48431 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SOX2P48431 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SOX2P48431 AC000374.1-201ENST00000434698 1745 ntBASIC4.55□□□□□ -1.68
SOX2P48431 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SOX2P48431 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SOX2P48431 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SOX2P48431 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SOX2P48431 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.55□□□□□ -1.68
SOX2P48431 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.55□□□□□ -1.68
SOX2P48431 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SOX2P48431 RNU4-44P-201ENST00000363050 141 ntBASIC4.55□□□□□ -1.68
SOX2P48431 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SOX2P48431 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SOX2P48431 AL390316.1-201ENST00000406279 553 ntBASIC4.55□□□□□ -1.68
SOX2P48431 AL139098.1-201ENST00000407291 389 ntBASIC4.55□□□□□ -1.68
SOX2P48431 RNU6-920P-201ENST00000410926 92 ntBASIC4.55□□□□□ -1.68
SOX2P48431 RPS15AP38-201ENST00000413110 372 ntBASIC4.55□□□□□ -1.68
SOX2P48431 CEACAMP8-201ENST00000413902 580 ntBASIC4.55□□□□□ -1.68
SOX2P48431 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.55□□□□□ -1.68
SOX2P48431 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.55□□□□□ -1.68
SOX2P48431 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.55□□□□□ -1.68
SOX2P48431 AC013429.2-201ENST00000418798 781 ntBASIC4.55□□□□□ -1.68
SOX2P48431 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.55□□□□□ -1.68
SOX2P48431 RPL34P3-201ENST00000421454 338 ntBASIC4.55□□□□□ -1.68
SOX2P48431 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SOX2P48431 AL513175.1-201ENST00000431492 780 ntBASIC4.55□□□□□ -1.68
SOX2P48431 PPIAP13-201ENST00000434706 478 ntBASIC4.55□□□□□ -1.68
SOX2P48431 RPS25P9-201ENST00000435591 252 ntBASIC4.55□□□□□ -1.68
SOX2P48431 MTCYBP39-201ENST00000437562 491 ntBASIC4.55□□□□□ -1.68
SOX2P48431 AL450263.2-201ENST00000439400 589 ntBASIC4.55□□□□□ -1.68
SOX2P48431 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.55□□□□□ -1.68
SOX2P48431 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.55□□□□□ -1.68
SOX2P48431 GAPDHP25-201ENST00000447061 1001 ntBASIC4.55□□□□□ -1.68
SOX2P48431 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.55□□□□□ -1.68
SOX2P48431 RN7SL515P-201ENST00000463999 297 ntBASIC4.55□□□□□ -1.68
SOX2P48431 AC104685.1-201ENST00000502445 371 ntBASIC4.55□□□□□ -1.68
SOX2P48431 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.55□□□□□ -1.68
SOX2P48431 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.55□□□□□ -1.68
SOX2P48431 ATP1B1P1-201ENST00000509767 915 ntBASIC4.55□□□□□ -1.68
SOX2P48431 HMGB3P13-201ENST00000511263 607 ntBASIC4.55□□□□□ -1.68
SOX2P48431 AC008494.2-201ENST00000514544 370 ntBASIC4.55□□□□□ -1.68
SOX2P48431 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.55□□□□□ -1.68
SOX2P48431 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.55□□□□□ -1.68
SOX2P48431 NRBF2P4-201ENST00000520874 850 ntBASIC4.55□□□□□ -1.68
SOX2P48431 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.55□□□□□ -1.68
SOX2P48431 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.55□□□□□ -1.68
SOX2P48431 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.55□□□□□ -1.68
SOX2P48431 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.55□□□□□ -1.68
SOX2P48431 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.55□□□□□ -1.68
SOX2P48431 RFPL1S-203ENST00000539579 330 ntBASIC4.55□□□□□ -1.68
SOX2P48431 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SOX2P48431 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.55□□□□□ -1.68
SOX2P48431 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.55□□□□□ -1.68
SOX2P48431 AC012435.1-202ENST00000568772 240 ntBASIC4.55□□□□□ -1.68
SOX2P48431 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.55□□□□□ -1.68
SOX2P48431 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.55□□□□□ -1.68
SOX2P48431 AC011840.5-201ENST00000582125 771 ntBASIC4.55□□□□□ -1.68
SOX2P48431 AC115085.1-201ENST00000588924 229 ntBASIC4.55□□□□□ -1.68
SOX2P48431 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SOX2P48431 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.55□□□□□ -1.68
SOX2P48431 AL138895.2-201ENST00000603019 178 ntBASIC4.55□□□□□ -1.68
SOX2P48431 AP001981.2-201ENST00000603241 418 ntBASIC4.55□□□□□ -1.68
SOX2P48431 AC091488.1-201ENST00000604239 660 ntBASIC4.55□□□□□ -1.68
SOX2P48431 AC112220.3-201ENST00000605502 502 ntBASIC4.55□□□□□ -1.68
SOX2P48431 AC009779.8-202ENST00000607990 932 ntBASIC4.55□□□□□ -1.68
SOX2P48431 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.55□□□□□ -1.68
SOX2P48431 AC005962.2-201ENST00000611427 652 ntBASIC4.55□□□□□ -1.68
SOX2P48431 AC008083.4-201ENST00000615076 444 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms