Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 MIR331-201ENST00000362302 94 ntBASIC4.37□□□□□ -1.71
TRIM23P36406 RNU4-31P-201ENST00000384211 141 ntBASIC4.37□□□□□ -1.71
TRIM23P36406 RNU6-146P-201ENST00000384602 108 ntBASIC4.37□□□□□ -1.71
TRIM23P36406 SNORD96B-201ENST00000386148 79 ntBASIC4.37□□□□□ -1.71
TRIM23P36406 RNA5SP239-201ENST00000410218 129 ntBASIC4.37□□□□□ -1.71
TRIM23P36406 AC011933.1-201ENST00000413334 321 ntBASIC4.37□□□□□ -1.71
TRIM23P36406 AC105402.1-201ENST00000413336 545 ntBASIC4.37□□□□□ -1.71
TRIM23P36406 SNRPFP1-201ENST00000414761 252 ntBASIC4.37□□□□□ -1.71
TRIM23P36406 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM23P36406 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.37□□□□□ -1.71
TRIM23P36406 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM23P36406 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM23P36406 ELOCP3-201ENST00000439303 348 ntBASIC4.37□□□□□ -1.71
TRIM23P36406 ARL4AP3-201ENST00000441452 574 ntBASIC4.37□□□□□ -1.71
TRIM23P36406 HMGB1P26-201ENST00000452520 628 ntBASIC4.37□□□□□ -1.71
TRIM23P36406 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM23P36406 AC116533.1-201ENST00000459748 321 ntBASIC4.37□□□□□ -1.71
TRIM23P36406 RPS27AP17-201ENST00000463344 455 ntBASIC4.37□□□□□ -1.71
TRIM23P36406 AC010618.1-201ENST00000469924 477 ntBASIC4.37□□□□□ -1.71
TRIM23P36406 RPS4XP18-201ENST00000495480 763 ntBASIC4.37□□□□□ -1.71
TRIM23P36406 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM23P36406 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM23P36406 RNU6-1004P-201ENST00000516584 111 ntBASIC4.37□□□□□ -1.71
TRIM23P36406 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM23P36406 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM23P36406 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM23P36406 PSMB7P1-201ENST00000556349 514 ntBASIC4.37□□□□□ -1.71
TRIM23P36406 PARP1P2-201ENST00000556806 195 ntBASIC4.37□□□□□ -1.71
TRIM23P36406 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM23P36406 AC005242.1-201ENST00000585658 438 ntBASIC4.37□□□□□ -1.71
TRIM23P36406 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM23P36406 MIR6716-201ENST00000613413 80 ntBASIC4.37□□□□□ -1.71
TRIM23P36406 AL356094.1-201ENST00000624663 1212 ntBASIC4.37□□□□□ -1.71
TRIM23P36406 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.37□□□□□ -1.71
TRIM23P36406 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
TRIM23P36406 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM23P36406 AC009501.3-201ENST00000605001 1352 ntBASIC4.37□□□□□ -1.71
TRIM23P36406 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM23P36406 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TRIM23P36406 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
TRIM23P36406 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM23P36406 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM23P36406 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM23P36406 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TRIM23P36406 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TRIM23P36406 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM23P36406 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM23P36406 AC026951.1-201ENST00000559530 2459 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM23P36406 RNA5SP366-201ENST00000365454 123 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM23P36406 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM23P36406 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.36□□□□□ -1.71
TRIM23P36406 RNU1-63P-201ENST00000383902 164 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 OR6C69P-201ENST00000394268 893 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 RPS27AP11-201ENST00000402798 447 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM23P36406 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM23P36406 CYP4F29P-201ENST00000420685 446 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM23P36406 RSL24D1P6-201ENST00000426934 401 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM23P36406 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM23P36406 ACTR3P2-201ENST00000439585 1257 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 UBE2V1P3-201ENST00000439651 417 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 AL691517.1-201ENST00000440833 1235 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM23P36406 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM23P36406 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM23P36406 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM23P36406 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM23P36406 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM23P36406 AC005229.2-201ENST00000456995 399 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 RPL7P32-201ENST00000457119 744 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM23P36406 RPL23AP12-201ENST00000467573 473 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 AC091167.1-201ENST00000492017 396 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 RN7SL812P-201ENST00000493791 279 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM23P36406 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM23P36406 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.36□□□□□ -1.71
TRIM23P36406 IGHV3-32-201ENST00000519182 355 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM23P36406 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM23P36406 AC007424.1-203ENST00000554613 687 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 CKS1BP1-201ENST00000555221 240 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM23P36406 AC233266.2-201ENST00000567067 528 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 KPNA2P3-201ENST00000584190 848 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM23P36406 RPL7P50-201ENST00000600588 727 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM23P36406 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM23P36406 AC091979.2-201ENST00000607514 214 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 AC139769.3-201ENST00000618383 175 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM23P36406 AC000123.2-201ENST00000623124 461 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
TRIM23P36406 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms