Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 HSPE1P1-201ENST00000421494 318 ntBASIC7.58□□□□□ -1.2
CLCN1P35523 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC7.58□□□□□ -1.2
CLCN1P35523 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC7.58□□□□□ -1.2
CLCN1P35523 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC7.58□□□□□ -1.2
CLCN1P35523 RPL23AP74-201ENST00000437246 471 ntBASIC7.58□□□□□ -1.2
CLCN1P35523 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC7.58□□□□□ -1.2
CLCN1P35523 AL049734.2-201ENST00000441066 616 ntBASIC7.58□□□□□ -1.2
CLCN1P35523 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC7.58□□□□□ -1.2
CLCN1P35523 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC7.58□□□□□ -1.2
CLCN1P35523 AC005741.1-201ENST00000511094 432 ntBASIC7.58□□□□□ -1.2
CLCN1P35523 TTC39CP1-201ENST00000512513 755 ntBASIC7.58□□□□□ -1.2
CLCN1P35523 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC7.58□□□□□ -1.2
CLCN1P35523 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC7.58□□□□□ -1.2
CLCN1P35523 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC7.58□□□□□ -1.2
CLCN1P35523 CASP1-212ENST00000531166 300 ntTSL 5 BASIC7.58□□□□□ -1.2
CLCN1P35523 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC7.58□□□□□ -1.2
CLCN1P35523 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC7.58□□□□□ -1.2
CLCN1P35523 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.58□□□□□ -1.2
CLCN1P35523 MIR4685-201ENST00000578185 69 ntBASIC7.58□□□□□ -1.2
CLCN1P35523 AC100830.2-201ENST00000581636 240 ntBASIC7.58□□□□□ -1.2
CLCN1P35523 MIR4786-201ENST00000583954 80 ntBASIC7.58□□□□□ -1.2
CLCN1P35523 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC7.58□□□□□ -1.2
CLCN1P35523 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC7.58□□□□□ -1.2
CLCN1P35523 AL080274.1-201ENST00000605565 220 ntBASIC7.58□□□□□ -1.2
CLCN1P35523 AL136139.1-201ENST00000605568 222 ntBASIC7.58□□□□□ -1.2
CLCN1P35523 HSPE1P14-201ENST00000605812 302 ntBASIC7.58□□□□□ -1.2
CLCN1P35523 AL022345.1-201ENST00000607292 135 ntBASIC7.58□□□□□ -1.2
CLCN1P35523 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC7.58□□□□□ -1.2
CLCN1P35523 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.58□□□□□ -1.2
CLCN1P35523 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.58□□□□□ -1.2
CLCN1P35523 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CLCN1P35523 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC7.58□□□□□ -1.2
CLCN1P35523 UBA3-213ENST00000631029 123 ntTSL 5 BASIC7.58□□□□□ -1.2
CLCN1P35523 AL133216.2-202ENST00000634512 349 ntBASIC7.58□□□□□ -1.2
CLCN1P35523 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC7.58□□□□□ -1.2
CLCN1P35523 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CLCN1P35523 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CLCN1P35523 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
CLCN1P35523 AC024651.2-201ENST00000562480 2098 ntBASIC7.58□□□□□ -1.2
CLCN1P35523 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
CLCN1P35523 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CLCN1P35523 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.58□□□□□ -1.2
CLCN1P35523 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CLCN1P35523 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CLCN1P35523 AC130304.1-201ENST00000622942 2385 ntBASIC7.57□□□□□ -1.2
CLCN1P35523 MTCO1P12-201ENST00000414273 1543 ntBASIC7.57□□□□□ -1.2
CLCN1P35523 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CLCN1P35523 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CLCN1P35523 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CLCN1P35523 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC7.57□□□□□ -1.2
CLCN1P35523 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CLCN1P35523 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CLCN1P35523 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC7.57□□□□□ -1.2
CLCN1P35523 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC7.57□□□□□ -1.2
CLCN1P35523 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CLCN1P35523 RNA5SP394-201ENST00000364216 119 ntBASIC7.57□□□□□ -1.2
CLCN1P35523 RNA5SP172-201ENST00000365061 118 ntBASIC7.57□□□□□ -1.2
CLCN1P35523 RNU6-574P-201ENST00000384265 107 ntBASIC7.57□□□□□ -1.2
CLCN1P35523 RNU6-831P-201ENST00000384548 107 ntBASIC7.57□□□□□ -1.2
CLCN1P35523 ARF4P3-201ENST00000397387 509 ntBASIC7.57□□□□□ -1.2
CLCN1P35523 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CLCN1P35523 RPL23AP17-201ENST00000401064 499 ntBASIC7.57□□□□□ -1.2
CLCN1P35523 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.57□□□□□ -1.2
CLCN1P35523 ERLEC1P1-201ENST00000433806 578 ntBASIC7.57□□□□□ -1.2
CLCN1P35523 ANXA2P2-201ENST00000435128 1020 ntBASIC7.57□□□□□ -1.2
CLCN1P35523 MTND3P16-201ENST00000452205 344 ntBASIC7.57□□□□□ -1.2
CLCN1P35523 AC019080.2-201ENST00000453859 394 ntBASIC7.57□□□□□ -1.2
CLCN1P35523 RPL7AP10-201ENST00000481016 791 ntBASIC7.57□□□□□ -1.2
CLCN1P35523 TAF8-207ENST00000482432 556 ntTSL 2 BASIC7.57□□□□□ -1.2
CLCN1P35523 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC7.57□□□□□ -1.2
CLCN1P35523 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC7.57□□□□□ -1.2
CLCN1P35523 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC7.57□□□□□ -1.2
CLCN1P35523 SCARNA24.1-201ENST00000516465 137 ntBASIC7.57□□□□□ -1.2
CLCN1P35523 RNA5SP337-201ENST00000517007 109 ntBASIC7.57□□□□□ -1.2
CLCN1P35523 Y_RNA.718-201ENST00000517110 102 ntBASIC7.57□□□□□ -1.2
CLCN1P35523 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC7.57□□□□□ -1.2
CLCN1P35523 SOD1P3-201ENST00000518682 454 ntBASIC7.57□□□□□ -1.2
CLCN1P35523 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC7.57□□□□□ -1.2
CLCN1P35523 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC7.57□□□□□ -1.2
CLCN1P35523 AP003084.1-201ENST00000524828 742 ntBASIC7.57□□□□□ -1.2
CLCN1P35523 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC7.57□□□□□ -1.2
CLCN1P35523 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC7.57□□□□□ -1.2
CLCN1P35523 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.57□□□□□ -1.2
CLCN1P35523 FAM30C-201ENST00000561158 410 ntBASIC7.57□□□□□ -1.2
CLCN1P35523 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.57□□□□□ -1.2
CLCN1P35523 DPPA3P3-201ENST00000603842 430 ntBASIC7.57□□□□□ -1.2
CLCN1P35523 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC7.57□□□□□ -1.2
CLCN1P35523 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC7.57□□□□□ -1.2
CLCN1P35523 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC7.57□□□□□ -1.2
CLCN1P35523 AL122125.1-201ENST00000616999 600 ntBASIC7.57□□□□□ -1.2
CLCN1P35523 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.57□□□□□ -1.2
CLCN1P35523 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
CLCN1P35523 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
CLCN1P35523 AC012618.3-205ENST00000637896 1496 ntBASIC7.56□□□□□ -1.2
CLCN1P35523 TUBBP10-201ENST00000427668 1301 ntBASIC7.56□□□□□ -1.2
CLCN1P35523 LCOR-201ENST00000286067 4542 ntBASIC7.56□□□□□ -1.2
CLCN1P35523 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC7.56□□□□□ -1.2
CLCN1P35523 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CLCN1P35523 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CLCN1P35523 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms