Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.95□□□□□ -1.3
RFX1P22670 SBDSP1-204ENST00000453858 737 ntBASIC6.95□□□□□ -1.3
RFX1P22670 MTND1P12-201ENST00000455231 147 ntBASIC6.95□□□□□ -1.3
RFX1P22670 Z83838.1-202ENST00000456225 839 ntBASIC6.95□□□□□ -1.3
RFX1P22670 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.95□□□□□ -1.3
RFX1P22670 AC022206.1-201ENST00000495947 347 ntBASIC6.95□□□□□ -1.3
RFX1P22670 RNF138P1-201ENST00000502765 546 ntBASIC6.95□□□□□ -1.3
RFX1P22670 AC093870.1-201ENST00000506837 213 ntBASIC6.95□□□□□ -1.3
RFX1P22670 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC6.95□□□□□ -1.3
RFX1P22670 AC025465.4-201ENST00000513422 638 ntBASIC6.95□□□□□ -1.3
RFX1P22670 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC6.95□□□□□ -1.3
RFX1P22670 MTCO1P35-201ENST00000515270 228 ntBASIC6.95□□□□□ -1.3
RFX1P22670 SNORA81.2-201ENST00000516868 170 ntBASIC6.95□□□□□ -1.3
RFX1P22670 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC6.95□□□□□ -1.3
RFX1P22670 AP000859.1-201ENST00000525536 307 ntBASIC6.95□□□□□ -1.3
RFX1P22670 AF235103.2-201ENST00000525753 346 ntBASIC6.95□□□□□ -1.3
RFX1P22670 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.95□□□□□ -1.3
RFX1P22670 AC026956.1-201ENST00000558741 396 ntBASIC6.95□□□□□ -1.3
RFX1P22670 AP005119.2-201ENST00000579735 1105 ntBASIC6.95□□□□□ -1.3
RFX1P22670 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC6.95□□□□□ -1.3
RFX1P22670 RPL12P25-202ENST00000598100 674 ntBASIC6.95□□□□□ -1.3
RFX1P22670 AC087045.1-201ENST00000605856 382 ntBASIC6.95□□□□□ -1.3
RFX1P22670 AC128687.2-201ENST00000609657 566 ntBASIC6.95□□□□□ -1.3
RFX1P22670 AL121757.2-201ENST00000611223 313 ntBASIC6.95□□□□□ -1.3
RFX1P22670 AC009237.17-201ENST00000618111 748 ntBASIC6.95□□□□□ -1.3
RFX1P22670 AP006248.2-201ENST00000623309 592 ntBASIC6.95□□□□□ -1.3
RFX1P22670 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
RFX1P22670 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RFX1P22670 AP000473.2-201ENST00000602659 1537 ntBASIC6.95□□□□□ -1.3
RFX1P22670 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
RFX1P22670 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RFX1P22670 CUBNP3-201ENST00000457461 1784 ntBASIC6.95□□□□□ -1.3
RFX1P22670 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RFX1P22670 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
RFX1P22670 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RFX1P22670 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RFX1P22670 AL355377.1-201ENST00000621125 1653 ntBASIC6.94□□□□□ -1.3
RFX1P22670 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RFX1P22670 AL445437.1-201ENST00000623157 3087 ntBASIC6.94□□□□□ -1.3
RFX1P22670 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.94□□□□□ -1.3
RFX1P22670 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
RFX1P22670 MIR188-201ENST00000385034 86 ntBASIC6.94□□□□□ -1.3
RFX1P22670 GCNT1P4-201ENST00000404096 329 ntBASIC6.94□□□□□ -1.3
RFX1P22670 SNORA77.2-201ENST00000408571 112 ntBASIC6.94□□□□□ -1.3
RFX1P22670 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC6.94□□□□□ -1.3
RFX1P22670 CYP4F30P-202ENST00000420048 405 ntBASIC6.94□□□□□ -1.3
RFX1P22670 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC6.94□□□□□ -1.3
RFX1P22670 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
RFX1P22670 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC6.94□□□□□ -1.3
RFX1P22670 COL11A2P1-205ENST00000441798 676 ntBASIC6.94□□□□□ -1.3
RFX1P22670 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC6.94□□□□□ -1.3
RFX1P22670 CEACAMP9-201ENST00000442990 513 ntBASIC6.94□□□□□ -1.3
RFX1P22670 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC6.94□□□□□ -1.3
RFX1P22670 GAPDHP14-201ENST00000450472 937 ntBASIC6.94□□□□□ -1.3
RFX1P22670 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.94□□□□□ -1.3
RFX1P22670 SETP20-201ENST00000457046 852 ntBASIC6.94□□□□□ -1.3
RFX1P22670 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.94□□□□□ -1.3
RFX1P22670 RPL7P51-201ENST00000490532 749 ntBASIC6.94□□□□□ -1.3
RFX1P22670 AP001025.2-201ENST00000490908 477 ntBASIC6.94□□□□□ -1.3
RFX1P22670 AC005726.1-201ENST00000494679 427 ntBASIC6.94□□□□□ -1.3
RFX1P22670 RPSAP51-201ENST00000497462 645 ntBASIC6.94□□□□□ -1.3
RFX1P22670 HMGN1P12-201ENST00000499125 195 ntBASIC6.94□□□□□ -1.3
RFX1P22670 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.94□□□□□ -1.3
RFX1P22670 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC6.94□□□□□ -1.3
RFX1P22670 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC6.94□□□□□ -1.3
RFX1P22670 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC6.94□□□□□ -1.3
RFX1P22670 RNU6-714P-201ENST00000516963 103 ntBASIC6.94□□□□□ -1.3
RFX1P22670 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC6.94□□□□□ -1.3
RFX1P22670 AP003181.2-201ENST00000528941 181 ntBASIC6.94□□□□□ -1.3
RFX1P22670 AC018552.1-201ENST00000562099 811 ntBASIC6.94□□□□□ -1.3
RFX1P22670 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RFX1P22670 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC6.94□□□□□ -1.3
RFX1P22670 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.94□□□□□ -1.3
RFX1P22670 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC6.94□□□□□ -1.3
RFX1P22670 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.94□□□□□ -1.3
RFX1P22670 NRBF2P5-201ENST00000603087 788 ntBASIC6.94□□□□□ -1.3
RFX1P22670 AL009028.1-201ENST00000604895 802 ntBASIC6.94□□□□□ -1.3
RFX1P22670 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC6.94□□□□□ -1.3
RFX1P22670 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC6.94□□□□□ -1.3
RFX1P22670 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC6.94□□□□□ -1.3
RFX1P22670 MIR6085-201ENST00000618314 110 ntBASIC6.94□□□□□ -1.3
RFX1P22670 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RFX1P22670 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
RFX1P22670 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.94□□□□□ -1.3
RFX1P22670 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RFX1P22670 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.94□□□□□ -1.3
RFX1P22670 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.94□□□□□ -1.3
RFX1P22670 ACTR3BP2-202ENST00000623630 1338 ntBASIC6.94□□□□□ -1.3
RFX1P22670 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.94□□□□□ -1.3
RFX1P22670 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
RFX1P22670 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RFX1P22670 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
RFX1P22670 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.94□□□□□ -1.3
RFX1P22670 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
RFX1P22670 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RFX1P22670 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.94□□□□□ -1.3
RFX1P22670 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.93□□□□□ -1.3
RFX1P22670 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.93□□□□□ -1.3
RFX1P22670 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RFX1P22670 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms