Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 SNORA48.7-201ENST00000391302 135 ntBASIC3.71□□□□□ -1.82
USF1P22415 AL022722.2-201ENST00000402519 180 ntBASIC3.71□□□□□ -1.82
USF1P22415 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.71□□□□□ -1.82
USF1P22415 AL445189.1-201ENST00000405722 338 ntBASIC3.71□□□□□ -1.82
USF1P22415 DHFRP5-201ENST00000406944 564 ntBASIC3.71□□□□□ -1.82
USF1P22415 RNU6-628P-201ENST00000410675 107 ntBASIC3.71□□□□□ -1.82
USF1P22415 AC073464.3-201ENST00000422564 712 ntBASIC3.71□□□□□ -1.82
USF1P22415 RPS6P12-201ENST00000432491 726 ntBASIC3.71□□□□□ -1.82
USF1P22415 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.71□□□□□ -1.82
USF1P22415 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.71□□□□□ -1.82
USF1P22415 IFNWP4-201ENST00000453148 294 ntBASIC3.71□□□□□ -1.82
USF1P22415 RPS27AP17-201ENST00000463344 455 ntBASIC3.71□□□□□ -1.82
USF1P22415 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.71□□□□□ -1.82
USF1P22415 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.71□□□□□ -1.82
USF1P22415 PRELID3BP7-201ENST00000503606 469 ntBASIC3.71□□□□□ -1.82
USF1P22415 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
USF1P22415 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.71□□□□□ -1.82
USF1P22415 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.71□□□□□ -1.82
USF1P22415 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
USF1P22415 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.71□□□□□ -1.82
USF1P22415 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.71□□□□□ -1.82
USF1P22415 DEFB109D-201ENST00000529497 240 ntBASIC3.71□□□□□ -1.82
USF1P22415 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.71□□□□□ -1.82
USF1P22415 AC135001.1-201ENST00000544546 283 ntBASIC3.71□□□□□ -1.82
USF1P22415 AC074029.2-201ENST00000551045 634 ntBASIC3.71□□□□□ -1.82
USF1P22415 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.71□□□□□ -1.82
USF1P22415 AC106785.1-201ENST00000565935 262 ntBASIC3.71□□□□□ -1.82
USF1P22415 AGGF1P6-201ENST00000569213 976 ntBASIC3.71□□□□□ -1.82
USF1P22415 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.71□□□□□ -1.82
USF1P22415 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.71□□□□□ -1.82
USF1P22415 ADAD1P2-201ENST00000588476 646 ntBASIC3.71□□□□□ -1.82
USF1P22415 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.71□□□□□ -1.82
USF1P22415 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.71□□□□□ -1.82
USF1P22415 AC084036.1-201ENST00000609190 508 ntBASIC3.71□□□□□ -1.82
USF1P22415 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.71□□□□□ -1.82
USF1P22415 AC119674.1-220ENST00000641502 1048 ntBASIC3.71□□□□□ -1.82
USF1P22415 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
USF1P22415 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
USF1P22415 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
USF1P22415 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
USF1P22415 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
USF1P22415 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.7□□□□□ -1.82
USF1P22415 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
USF1P22415 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USF1P22415 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
USF1P22415 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
USF1P22415 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
USF1P22415 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
USF1P22415 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.7□□□□□ -1.82
USF1P22415 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
USF1P22415 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
USF1P22415 RNU1-132P-201ENST00000364300 164 ntBASIC3.7□□□□□ -1.82
USF1P22415 RNU6-31P-201ENST00000384388 108 ntBASIC3.7□□□□□ -1.82
USF1P22415 MIR3065-201ENST00000390137 79 ntBASIC3.7□□□□□ -1.82
USF1P22415 AC025750.1-201ENST00000399891 379 ntBASIC3.7□□□□□ -1.82
USF1P22415 SNORA11F-201ENST00000408237 128 ntBASIC3.7□□□□□ -1.82
USF1P22415 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.7□□□□□ -1.82
USF1P22415 DPY19L1P2-201ENST00000426647 915 ntBASIC3.7□□□□□ -1.82
USF1P22415 AL132765.1-201ENST00000434165 553 ntBASIC3.7□□□□□ -1.82
USF1P22415 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.7□□□□□ -1.82
USF1P22415 HSFY6P-201ENST00000445573 403 ntBASIC3.7□□□□□ -1.82
USF1P22415 DHFRP3-201ENST00000455595 559 ntBASIC3.7□□□□□ -1.82
USF1P22415 ATP5G1P3-201ENST00000463301 410 ntBASIC3.7□□□□□ -1.82
USF1P22415 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.7□□□□□ -1.82
USF1P22415 MTND6P6-201ENST00000478031 263 ntBASIC3.7□□□□□ -1.82
USF1P22415 OR52A4P-203ENST00000498233 1014 ntBASIC3.7□□□□□ -1.82
USF1P22415 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.7□□□□□ -1.82
USF1P22415 AC108475.1-201ENST00000507880 950 ntBASIC3.7□□□□□ -1.82
USF1P22415 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.7□□□□□ -1.82
USF1P22415 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.7□□□□□ -1.82
USF1P22415 AC016550.3-201ENST00000515706 767 ntBASIC3.7□□□□□ -1.82
USF1P22415 RNU6-1308P-201ENST00000516817 103 ntBASIC3.7□□□□□ -1.82
USF1P22415 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.7□□□□□ -1.82
USF1P22415 HIGD1AP18-201ENST00000520730 278 ntBASIC3.7□□□□□ -1.82
USF1P22415 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.7□□□□□ -1.82
USF1P22415 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
USF1P22415 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.7□□□□□ -1.82
USF1P22415 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.7□□□□□ -1.82
USF1P22415 AC084757.1-201ENST00000559987 490 ntBASIC3.7□□□□□ -1.82
USF1P22415 AC110743.1-201ENST00000584870 478 ntBASIC3.7□□□□□ -1.82
USF1P22415 BPIFA4P-203ENST00000603168 689 ntBASIC3.7□□□□□ -1.82
USF1P22415 AC023762.1-201ENST00000603280 584 ntBASIC3.7□□□□□ -1.82
USF1P22415 AC025946.2-201ENST00000603398 234 ntBASIC3.7□□□□□ -1.82
USF1P22415 AC007423.1-201ENST00000605009 627 ntBASIC3.7□□□□□ -1.82
USF1P22415 AC026368.1-201ENST00000614934 690 ntBASIC3.7□□□□□ -1.82
USF1P22415 AC009318.3-201ENST00000616916 503 ntBASIC3.7□□□□□ -1.82
USF1P22415 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.7□□□□□ -1.82
USF1P22415 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
USF1P22415 AP006248.2-201ENST00000623309 592 ntBASIC3.7□□□□□ -1.82
USF1P22415 AC034229.5-201ENST00000624258 185 ntBASIC3.7□□□□□ -1.82
USF1P22415 AC090506.2-201ENST00000624521 419 ntBASIC3.7□□□□□ -1.82
USF1P22415 AC140479.6-201ENST00000633535 357 ntBASIC3.7□□□□□ -1.82
USF1P22415 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.7□□□□□ -1.82
USF1P22415 MIR492-201ENST00000638676 116 ntBASIC3.7□□□□□ -1.82
USF1P22415 OR2L1P-202ENST00000641567 1023 ntBASIC3.7□□□□□ -1.82
USF1P22415 AC007342.9-201ENST00000623877 1385 ntBASIC3.7□□□□□ -1.82
USF1P22415 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
USF1P22415 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USF1P22415 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.7□□□□□ -1.82
USF1P22415 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms