Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.26□□□□□ -1.73
XRCC1P18887 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
XRCC1P18887 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
XRCC1P18887 ZNF962P-201ENST00000443465 3140 ntBASIC4.26□□□□□ -1.73
XRCC1P18887 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.25□□□□□ -1.73
XRCC1P18887 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
XRCC1P18887 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
XRCC1P18887 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
XRCC1P18887 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.25□□□□□ -1.73
XRCC1P18887 RNU6-532P-201ENST00000384318 107 ntBASIC4.25□□□□□ -1.73
XRCC1P18887 MIR320B1-201ENST00000390209 79 ntBASIC4.25□□□□□ -1.73
XRCC1P18887 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
XRCC1P18887 Z86062.1-201ENST00000406773 777 ntBASIC4.25□□□□□ -1.73
XRCC1P18887 RPS20P14-201ENST00000412545 360 ntBASIC4.25□□□□□ -1.73
XRCC1P18887 RPL23AP26-201ENST00000412728 464 ntBASIC4.25□□□□□ -1.73
XRCC1P18887 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.25□□□□□ -1.73
XRCC1P18887 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.25□□□□□ -1.73
XRCC1P18887 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.25□□□□□ -1.73
XRCC1P18887 EIF2S2P3-201ENST00000428356 999 ntBASIC4.25□□□□□ -1.73
XRCC1P18887 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.25□□□□□ -1.73
XRCC1P18887 MTND2P21-201ENST00000436242 1042 ntBASIC4.25□□□□□ -1.73
XRCC1P18887 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
XRCC1P18887 AL512326.1-201ENST00000443050 721 ntBASIC4.25□□□□□ -1.73
XRCC1P18887 AC099063.2-201ENST00000446360 662 ntBASIC4.25□□□□□ -1.73
XRCC1P18887 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.25□□□□□ -1.73
XRCC1P18887 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.25□□□□□ -1.73
XRCC1P18887 AC243772.1-201ENST00000451620 410 ntBASIC4.25□□□□□ -1.73
XRCC1P18887 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
XRCC1P18887 AC009963.2-201ENST00000453431 138 ntBASIC4.25□□□□□ -1.73
XRCC1P18887 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.25□□□□□ -1.73
XRCC1P18887 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.25□□□□□ -1.73
XRCC1P18887 OR9N1P-202ENST00000494289 481 ntBASIC4.25□□□□□ -1.73
XRCC1P18887 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.25□□□□□ -1.73
XRCC1P18887 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
XRCC1P18887 OR5M7P-201ENST00000526140 972 ntBASIC4.25□□□□□ -1.73
XRCC1P18887 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.25□□□□□ -1.73
XRCC1P18887 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
XRCC1P18887 TRAV8-5-201ENST00000537369 341 ntBASIC4.25□□□□□ -1.73
XRCC1P18887 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.25□□□□□ -1.73
XRCC1P18887 AL049870.4-201ENST00000555741 486 ntBASIC4.25□□□□□ -1.73
XRCC1P18887 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
XRCC1P18887 AC023158.1-201ENST00000561632 1025 ntBASIC4.25□□□□□ -1.73
XRCC1P18887 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.25□□□□□ -1.73
XRCC1P18887 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.25□□□□□ -1.73
XRCC1P18887 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
XRCC1P18887 AC005034.4-201ENST00000603612 899 ntBASIC4.25□□□□□ -1.73
XRCC1P18887 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
XRCC1P18887 AC007390.2-201ENST00000606229 3803 ntBASIC4.25□□□□□ -1.73
XRCC1P18887 AL096803.3-201ENST00000609032 532 ntBASIC4.25□□□□□ -1.73
XRCC1P18887 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
XRCC1P18887 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
XRCC1P18887 AC107308.1-201ENST00000615897 301 ntBASIC4.25□□□□□ -1.73
XRCC1P18887 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.25□□□□□ -1.73
XRCC1P18887 AC016717.3-201ENST00000624730 554 ntBASIC4.25□□□□□ -1.73
XRCC1P18887 AC027290.2-201ENST00000623210 18662 ntBASIC4.25□□□□□ -1.73
XRCC1P18887 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
XRCC1P18887 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
XRCC1P18887 IQCB2P-201ENST00000401788 1633 ntBASIC4.24□□□□□ -1.73
XRCC1P18887 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.24□□□□□ -1.73
XRCC1P18887 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
XRCC1P18887 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
XRCC1P18887 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
XRCC1P18887 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.24□□□□□ -1.73
XRCC1P18887 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.24□□□□□ -1.73
XRCC1P18887 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
XRCC1P18887 SNORD115-48-201ENST00000364764 76 ntBASIC4.24□□□□□ -1.73
XRCC1P18887 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
XRCC1P18887 RNU4-31P-201ENST00000384211 141 ntBASIC4.24□□□□□ -1.73
XRCC1P18887 FABP12P1-201ENST00000401911 322 ntBASIC4.24□□□□□ -1.73
XRCC1P18887 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.24□□□□□ -1.73
XRCC1P18887 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.24□□□□□ -1.73
XRCC1P18887 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.24□□□□□ -1.73
XRCC1P18887 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.24□□□□□ -1.73
XRCC1P18887 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.24□□□□□ -1.73
XRCC1P18887 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.24□□□□□ -1.73
XRCC1P18887 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.24□□□□□ -1.73
XRCC1P18887 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.24□□□□□ -1.73
XRCC1P18887 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.24□□□□□ -1.73
XRCC1P18887 MTCO3P21-201ENST00000430791 643 ntBASIC4.24□□□□□ -1.73
XRCC1P18887 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.24□□□□□ -1.73
XRCC1P18887 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.24□□□□□ -1.73
XRCC1P18887 ELOCP8-201ENST00000439309 332 ntBASIC4.24□□□□□ -1.73
XRCC1P18887 RPL23AP52-201ENST00000439311 478 ntBASIC4.24□□□□□ -1.73
XRCC1P18887 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
XRCC1P18887 BTBD7P2-201ENST00000441962 620 ntBASIC4.24□□□□□ -1.73
XRCC1P18887 ELOCP15-201ENST00000442090 332 ntBASIC4.24□□□□□ -1.73
XRCC1P18887 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.24□□□□□ -1.73
XRCC1P18887 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.24□□□□□ -1.73
XRCC1P18887 NUTF2P3-201ENST00000448540 384 ntBASIC4.24□□□□□ -1.73
XRCC1P18887 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
XRCC1P18887 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.24□□□□□ -1.73
XRCC1P18887 UQCRHP4-201ENST00000471686 272 ntBASIC4.24□□□□□ -1.73
XRCC1P18887 RPL35P6-201ENST00000490024 372 ntBASIC4.24□□□□□ -1.73
XRCC1P18887 RPS6P4-201ENST00000494693 758 ntBASIC4.24□□□□□ -1.73
XRCC1P18887 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.24□□□□□ -1.73
XRCC1P18887 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
XRCC1P18887 IGBP1P5-201ENST00000507524 1000 ntBASIC4.24□□□□□ -1.73
XRCC1P18887 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.24□□□□□ -1.73
XRCC1P18887 OR5BC1P-201ENST00000529327 739 ntBASIC4.24□□□□□ -1.73
XRCC1P18887 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms