Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 RNU1-14P-201ENST00000362759 152 ntBASIC4.01□□□□□ -1.77
SDC1P18827 AL512430.2-201ENST00000406786 339 ntBASIC4.01□□□□□ -1.77
SDC1P18827 RNU2-17P-201ENST00000410290 190 ntBASIC4.01□□□□□ -1.77
SDC1P18827 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.01□□□□□ -1.77
SDC1P18827 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.01□□□□□ -1.77
SDC1P18827 AC099336.2-201ENST00000422457 254 ntBASIC4.01□□□□□ -1.77
SDC1P18827 PTP4A1P3-201ENST00000433661 420 ntBASIC4.01□□□□□ -1.77
SDC1P18827 AL353748.1-201ENST00000440753 474 ntBASIC4.01□□□□□ -1.77
SDC1P18827 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.01□□□□□ -1.77
SDC1P18827 AC099560.2-201ENST00000457554 255 ntBASIC4.01□□□□□ -1.77
SDC1P18827 RPS20P4-201ENST00000461659 355 ntBASIC4.01□□□□□ -1.77
SDC1P18827 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.01□□□□□ -1.77
SDC1P18827 RN7SL205P-201ENST00000490174 284 ntBASIC4.01□□□□□ -1.77
SDC1P18827 RN7SL691P-201ENST00000494487 301 ntBASIC4.01□□□□□ -1.77
SDC1P18827 AC005912.1-201ENST00000495392 255 ntBASIC4.01□□□□□ -1.77
SDC1P18827 PPM1AP1-201ENST00000502740 1135 ntBASIC4.01□□□□□ -1.77
SDC1P18827 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.01□□□□□ -1.77
SDC1P18827 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SDC1P18827 SNORA31.13-201ENST00000516624 135 ntBASIC4.01□□□□□ -1.77
SDC1P18827 AC010476.1-201ENST00000519111 851 ntBASIC4.01□□□□□ -1.77
SDC1P18827 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.01□□□□□ -1.77
SDC1P18827 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SDC1P18827 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SDC1P18827 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.01□□□□□ -1.77
SDC1P18827 AC025918.2-201ENST00000558683 763 ntBASIC4.01□□□□□ -1.77
SDC1P18827 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.01□□□□□ -1.77
SDC1P18827 MIR548Y-201ENST00000582739 110 ntBASIC4.01□□□□□ -1.77
SDC1P18827 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.01□□□□□ -1.77
SDC1P18827 AL139395.1-201ENST00000603662 160 ntBASIC4.01□□□□□ -1.77
SDC1P18827 AC090525.3-201ENST00000605601 189 ntBASIC4.01□□□□□ -1.77
SDC1P18827 AC245389.2-201ENST00000616023 576 ntBASIC4.01□□□□□ -1.77
SDC1P18827 AC016957.2-201ENST00000616998 848 ntBASIC4.01□□□□□ -1.77
SDC1P18827 AC242843.1-201ENST00000618702 573 ntBASIC4.01□□□□□ -1.77
SDC1P18827 AC097372.4-201ENST00000625025 466 ntBASIC4.01□□□□□ -1.77
SDC1P18827 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.01□□□□□ -1.77
SDC1P18827 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SDC1P18827 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.01□□□□□ -1.77
SDC1P18827 AC092162.3-201ENST00000624511 1624 ntBASIC4.01□□□□□ -1.77
SDC1P18827 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
SDC1P18827 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.01□□□□□ -1.77
SDC1P18827 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.01□□□□□ -1.77
SDC1P18827 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SDC1P18827 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SDC1P18827 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SDC1P18827 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SDC1P18827 AL158163.1-201ENST00000603915 1649 ntBASIC4□□□□□ -1.77
SDC1P18827 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4□□□□□ -1.77
SDC1P18827 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4□□□□□ -1.77
SDC1P18827 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4□□□□□ -1.77
SDC1P18827 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
SDC1P18827 RNU6-398P-201ENST00000384143 109 ntBASIC4□□□□□ -1.77
SDC1P18827 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4□□□□□ -1.77
SDC1P18827 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4□□□□□ -1.77
SDC1P18827 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4□□□□□ -1.77
SDC1P18827 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4□□□□□ -1.77
SDC1P18827 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4□□□□□ -1.77
SDC1P18827 AL772161.1-201ENST00000439130 476 ntBASIC4□□□□□ -1.77
SDC1P18827 AC069285.2-201ENST00000440210 275 ntBASIC4□□□□□ -1.77
SDC1P18827 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4□□□□□ -1.77
SDC1P18827 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4□□□□□ -1.77
SDC1P18827 RPL34P26-201ENST00000445636 354 ntBASIC4□□□□□ -1.77
SDC1P18827 AC099063.2-201ENST00000446360 662 ntBASIC4□□□□□ -1.77
SDC1P18827 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4□□□□□ -1.77
SDC1P18827 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4□□□□□ -1.77
SDC1P18827 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4□□□□□ -1.77
SDC1P18827 AC093720.1-201ENST00000505681 714 ntBASIC4□□□□□ -1.77
SDC1P18827 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4□□□□□ -1.77
SDC1P18827 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4□□□□□ -1.77
SDC1P18827 RNA5SP519-201ENST00000516480 119 ntBASIC4□□□□□ -1.77
SDC1P18827 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4□□□□□ -1.77
SDC1P18827 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4□□□□□ -1.77
SDC1P18827 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4□□□□□ -1.77
SDC1P18827 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4□□□□□ -1.77
SDC1P18827 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4□□□□□ -1.77
SDC1P18827 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4□□□□□ -1.77
SDC1P18827 AC007599.1-201ENST00000568688 1174 ntBASIC4□□□□□ -1.77
SDC1P18827 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4□□□□□ -1.77
SDC1P18827 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4□□□□□ -1.77
SDC1P18827 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4□□□□□ -1.77
SDC1P18827 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4□□□□□ -1.77
SDC1P18827 AL035461.2-201ENST00000619201 524 ntBASIC4□□□□□ -1.77
SDC1P18827 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4□□□□□ -1.77
SDC1P18827 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4□□□□□ -1.77
SDC1P18827 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4□□□□□ -1.77
SDC1P18827 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SDC1P18827 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
SDC1P18827 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4□□□□□ -1.77
SDC1P18827 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SDC1P18827 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4□□□□□ -1.77
SDC1P18827 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SDC1P18827 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SDC1P18827 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SDC1P18827 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SDC1P18827 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.99□□□□□ -1.77
SDC1P18827 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SDC1P18827 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
SDC1P18827 AC012020.1-201ENST00000624541 1728 ntBASIC3.99□□□□□ -1.77
SDC1P18827 AC010329.2-201ENST00000595195 2737 ntBASIC3.99□□□□□ -1.77
SDC1P18827 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.99□□□□□ -1.77
SDC1P18827 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms