Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.54□□□□□ -1.84
FREM3P0C091 SNORA60-201ENST00000362396 134 ntBASIC3.53□□□□□ -1.84
FREM3P0C091 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.53□□□□□ -1.84
FREM3P0C091 AL445213.1-201ENST00000412589 747 ntBASIC3.53□□□□□ -1.84
FREM3P0C091 ATP5HP2-201ENST00000433885 485 ntBASIC3.53□□□□□ -1.84
FREM3P0C091 RPS3AP46-201ENST00000448352 682 ntBASIC3.53□□□□□ -1.84
FREM3P0C091 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.53□□□□□ -1.84
FREM3P0C091 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.53□□□□□ -1.84
FREM3P0C091 UBDP1-202ENST00000457888 382 ntBASIC3.53□□□□□ -1.84
FREM3P0C091 RPL7P15-201ENST00000461190 712 ntBASIC3.53□□□□□ -1.84
FREM3P0C091 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.53□□□□□ -1.84
FREM3P0C091 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.53□□□□□ -1.84
FREM3P0C091 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.53□□□□□ -1.84
FREM3P0C091 AC128687.2-201ENST00000609657 566 ntBASIC3.53□□□□□ -1.84
FREM3P0C091 AC124312.6-202ENST00000623624 418 ntBASIC3.53□□□□□ -1.84
FREM3P0C091 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
FREM3P0C091 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
FREM3P0C091 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
FREM3P0C091 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
FREM3P0C091 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
FREM3P0C091 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
FREM3P0C091 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
FREM3P0C091 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.53□□□□□ -1.84
FREM3P0C091 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.53□□□□□ -1.84
FREM3P0C091 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.53□□□□□ -1.84
FREM3P0C091 RPL7P2-201ENST00000427639 268 ntBASIC3.53□□□□□ -1.84
FREM3P0C091 HIGD1AP4-201ENST00000430194 280 ntBASIC3.53□□□□□ -1.84
FREM3P0C091 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.53□□□□□ -1.84
FREM3P0C091 AC069285.2-201ENST00000440210 275 ntBASIC3.53□□□□□ -1.84
FREM3P0C091 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.53□□□□□ -1.84
FREM3P0C091 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
FREM3P0C091 HMGB3P22-202ENST00000451823 572 ntBASIC3.53□□□□□ -1.84
FREM3P0C091 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.53□□□□□ -1.84
FREM3P0C091 AC008155.2-201ENST00000464337 397 ntBASIC3.53□□□□□ -1.84
FREM3P0C091 RNU7-143P-201ENST00000516781 65 ntBASIC3.53□□□□□ -1.84
FREM3P0C091 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
FREM3P0C091 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
FREM3P0C091 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
FREM3P0C091 SNORD46.1-201ENST00000364139 104 ntBASIC3.52□□□□□ -1.85
FREM3P0C091 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
FREM3P0C091 MIR1251-201ENST00000408552 70 ntBASIC3.52□□□□□ -1.85
FREM3P0C091 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.52□□□□□ -1.85
FREM3P0C091 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.52□□□□□ -1.85
FREM3P0C091 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.52□□□□□ -1.85
FREM3P0C091 AC006946.1-201ENST00000429106 328 ntBASIC3.52□□□□□ -1.85
FREM3P0C091 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
FREM3P0C091 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.52□□□□□ -1.85
FREM3P0C091 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
FREM3P0C091 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.52□□□□□ -1.85
FREM3P0C091 RNA5SP154-201ENST00000516193 111 ntBASIC3.52□□□□□ -1.85
FREM3P0C091 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC3.52□□□□□ -1.85
FREM3P0C091 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
FREM3P0C091 AL390334.1-201ENST00000556395 450 ntBASIC3.52□□□□□ -1.85
FREM3P0C091 AC245389.1-201ENST00000605141 529 ntBASIC3.52□□□□□ -1.85
FREM3P0C091 AC244517.3-201ENST00000616254 1235 ntBASIC3.52□□□□□ -1.85
FREM3P0C091 AC112200.1-201ENST00000625015 234 ntBASIC3.52□□□□□ -1.85
FREM3P0C091 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.52□□□□□ -1.85
FREM3P0C091 AF001550.2-201ENST00000636643 217 ntBASIC3.52□□□□□ -1.85
FREM3P0C091 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
FREM3P0C091 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
FREM3P0C091 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
FREM3P0C091 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
FREM3P0C091 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
FREM3P0C091 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
FREM3P0C091 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.52□□□□□ -1.85
FREM3P0C091 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
FREM3P0C091 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.52□□□□□ -1.85
FREM3P0C091 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
FREM3P0C091 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
FREM3P0C091 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
FREM3P0C091 U1.1-201ENST00000384101 164 ntBASIC3.52□□□□□ -1.85
FREM3P0C091 RNA5SP39-201ENST00000411245 120 ntBASIC3.52□□□□□ -1.85
FREM3P0C091 NPM1P34-201ENST00000428821 893 ntBASIC3.52□□□□□ -1.85
FREM3P0C091 SUMO2P4-201ENST00000504193 276 ntBASIC3.52□□□□□ -1.85
FREM3P0C091 RN7SKP83-201ENST00000516512 178 ntBASIC3.52□□□□□ -1.85
FREM3P0C091 IGKV2-38-201ENST00000517443 247 ntBASIC3.52□□□□□ -1.85
FREM3P0C091 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.52□□□□□ -1.85
FREM3P0C091 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.52□□□□□ -1.85
FREM3P0C091 AL121834.1-201ENST00000572284 509 ntBASIC3.52□□□□□ -1.85
FREM3P0C091 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.52□□□□□ -1.85
FREM3P0C091 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.52□□□□□ -1.85
FREM3P0C091 MIR6868-201ENST00000611215 58 ntBASIC3.52□□□□□ -1.85
FREM3P0C091 AC079298.2-201ENST00000623885 459 ntBASIC3.52□□□□□ -1.85
FREM3P0C091 AL356121.2-201ENST00000624715 780 ntBASIC3.52□□□□□ -1.85
FREM3P0C091 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
FREM3P0C091 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
FREM3P0C091 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
FREM3P0C091 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.51□□□□□ -1.85
FREM3P0C091 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
FREM3P0C091 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
FREM3P0C091 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
FREM3P0C091 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.51□□□□□ -1.85
FREM3P0C091 RPL5P32-201ENST00000454085 879 ntBASIC3.51□□□□□ -1.85
FREM3P0C091 AC018635.1-201ENST00000468292 1030 ntBASIC3.51□□□□□ -1.85
FREM3P0C091 AC146944.2-203ENST00000502493 354 ntBASIC3.51□□□□□ -1.85
FREM3P0C091 AC139495.1-202ENST00000513164 354 ntBASIC3.51□□□□□ -1.85
FREM3P0C091 NDUFB4P12-201ENST00000513465 390 ntBASIC3.51□□□□□ -1.85
FREM3P0C091 AC026403.1-201ENST00000518938 295 ntBASIC3.51□□□□□ -1.85
FREM3P0C091 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.51□□□□□ -1.85
FREM3P0C091 AL360157.1-201ENST00000565962 87 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms