Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL391219.1-201ENST00000422570 483 ntBASIC3.93□□□□□ -1.78
HLA-DQB2P05538 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 RPS3AP6-201ENST00000484430 795 ntBASIC3.93□□□□□ -1.78
HLA-DQB2P05538 VN1R105P-201ENST00000486595 910 ntBASIC3.93□□□□□ -1.78
HLA-DQB2P05538 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 AC109458.1-201ENST00000508858 316 ntBASIC3.93□□□□□ -1.78
HLA-DQB2P05538 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 RN7SKP21-201ENST00000516503 220 ntBASIC3.93□□□□□ -1.78
HLA-DQB2P05538 AF186190.1-201ENST00000517470 480 ntBASIC3.93□□□□□ -1.78
HLA-DQB2P05538 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 OR8R1P-201ENST00000543943 764 ntBASIC3.93□□□□□ -1.78
HLA-DQB2P05538 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.93□□□□□ -1.78
HLA-DQB2P05538 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 AC090877.1-201ENST00000561418 344 ntBASIC3.93□□□□□ -1.78
HLA-DQB2P05538 AGGF1P6-201ENST00000569213 976 ntBASIC3.93□□□□□ -1.78
HLA-DQB2P05538 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 AC010857.1-201ENST00000606398 594 ntBASIC3.93□□□□□ -1.78
HLA-DQB2P05538 AC092653.1-201ENST00000608509 531 ntBASIC3.93□□□□□ -1.78
HLA-DQB2P05538 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 AC131238.1-201ENST00000617135 328 ntBASIC3.93□□□□□ -1.78
HLA-DQB2P05538 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 MFSD8-220ENST00000641243 1422 ntBASIC3.93□□□□□ -1.78
HLA-DQB2P05538 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQB2P05538 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HLA-DQB2P05538 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQB2P05538 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
HLA-DQB2P05538 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
HLA-DQB2P05538 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DQB2P05538 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DQB2P05538 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DQB2P05538 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
HLA-DQB2P05538 RNA5SP515-201ENST00000364570 118 ntBASIC3.92□□□□□ -1.78
HLA-DQB2P05538 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DQB2P05538 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DQB2P05538 NIPA2P1-201ENST00000426223 976 ntBASIC3.92□□□□□ -1.78
HLA-DQB2P05538 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.92□□□□□ -1.78
HLA-DQB2P05538 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DQB2P05538 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HLA-DQB2P05538 AC010460.1-201ENST00000507087 466 ntBASIC3.92□□□□□ -1.78
HLA-DQB2P05538 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DQB2P05538 HMGB3P13-201ENST00000511263 607 ntBASIC3.92□□□□□ -1.78
HLA-DQB2P05538 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.92□□□□□ -1.78
HLA-DQB2P05538 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DQB2P05538 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
HLA-DQB2P05538 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DQB2P05538 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.92□□□□□ -1.78
HLA-DQB2P05538 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DQB2P05538 AC090312.1-201ENST00000580637 348 ntBASIC3.92□□□□□ -1.78
HLA-DQB2P05538 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DQB2P05538 AC067838.1-201ENST00000606064 577 ntBASIC3.92□□□□□ -1.78
HLA-DQB2P05538 FP236240.3-201ENST00000623061 327 ntBASIC3.92□□□□□ -1.78
HLA-DQB2P05538 ATE1-AS1-202ENST00000636460 506 ntBASIC3.92□□□□□ -1.78
HLA-DQB2P05538 AF001550.2-201ENST00000636643 217 ntBASIC3.92□□□□□ -1.78
HLA-DQB2P05538 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
HLA-DQB2P05538 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.92□□□□□ -1.78
HLA-DQB2P05538 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DQB2P05538 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DQB2P05538 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DQB2P05538 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DQB2P05538 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
HLA-DQB2P05538 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DQB2P05538 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.91□□□□□ -1.78
HLA-DQB2P05538 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.91□□□□□ -1.78
HLA-DQB2P05538 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DQB2P05538 RNU6-729P-201ENST00000384399 107 ntBASIC3.91□□□□□ -1.78
HLA-DQB2P05538 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DQB2P05538 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DQB2P05538 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.91□□□□□ -1.78
HLA-DQB2P05538 YWHAEP5-201ENST00000431545 765 ntBASIC3.91□□□□□ -1.78
HLA-DQB2P05538 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DQB2P05538 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.91□□□□□ -1.78
HLA-DQB2P05538 RPSAP41-201ENST00000439695 860 ntBASIC3.91□□□□□ -1.78
HLA-DQB2P05538 AL356535.1-201ENST00000440335 398 ntBASIC3.91□□□□□ -1.78
HLA-DQB2P05538 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DQB2P05538 YWHAQP9-201ENST00000445891 512 ntBASIC3.91□□□□□ -1.78
HLA-DQB2P05538 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DQB2P05538 AL500522.2-201ENST00000448562 343 ntBASIC3.91□□□□□ -1.78
HLA-DQB2P05538 NPM1P39-201ENST00000449818 867 ntBASIC3.91□□□□□ -1.78
HLA-DQB2P05538 OR9M1P-201ENST00000459641 921 ntBASIC3.91□□□□□ -1.78
HLA-DQB2P05538 RNA5SP208-201ENST00000516156 78 ntBASIC3.91□□□□□ -1.78
HLA-DQB2P05538 AC018442.3-201ENST00000523025 183 ntBASIC3.91□□□□□ -1.78
HLA-DQB2P05538 MTND2P17-201ENST00000550281 688 ntBASIC3.91□□□□□ -1.78
HLA-DQB2P05538 MIR3160-1-201ENST00000577972 85 ntBASIC3.91□□□□□ -1.78
HLA-DQB2P05538 AC053481.4-201ENST00000583164 216 ntBASIC3.91□□□□□ -1.78
HLA-DQB2P05538 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.91□□□□□ -1.78
HLA-DQB2P05538 AC087468.1-201ENST00000604365 630 ntBASIC3.91□□□□□ -1.78
HLA-DQB2P05538 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.91□□□□□ -1.78
HLA-DQB2P05538 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.91□□□□□ -1.78
HLA-DQB2P05538 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
HLA-DQB2P05538 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms