Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC006517.1-201ENST00000480485 328 ntBASIC2.34□□□□□ -2.04
APOBP04114 CREM-238ENST00000488741 651 ntTSL 2 BASIC2.34□□□□□ -2.04
APOBP04114 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.34□□□□□ -2.04
APOBP04114 AC067852.3-201ENST00000589177 561 ntBASIC2.34□□□□□ -2.04
APOBP04114 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.34□□□□□ -2.04
APOBP04114 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC2.34□□□□□ -2.04
APOBP04114 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
APOBP04114 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.33□□□□□ -2.04
APOBP04114 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
APOBP04114 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
APOBP04114 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
APOBP04114 AC067945.1-201ENST00000342609 618 ntBASIC2.33□□□□□ -2.04
APOBP04114 MIR195-201ENST00000385194 87 ntBASIC2.33□□□□□ -2.04
APOBP04114 RBMY1KP-201ENST00000423480 476 ntBASIC2.33□□□□□ -2.04
APOBP04114 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC2.33□□□□□ -2.04
APOBP04114 HMGB1P37-201ENST00000439613 609 ntBASIC2.33□□□□□ -2.04
APOBP04114 AC108941.1-201ENST00000502853 530 ntBASIC2.33□□□□□ -2.04
APOBP04114 RNU2-27P-201ENST00000516185 142 ntBASIC2.33□□□□□ -2.04
APOBP04114 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC2.33□□□□□ -2.04
APOBP04114 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.33□□□□□ -2.04
APOBP04114 AL451007.1-201ENST00000595491 289 ntBASIC2.33□□□□□ -2.04
APOBP04114 AC136601.2-201ENST00000604356 474 ntBASIC2.33□□□□□ -2.04
APOBP04114 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC2.33□□□□□ -2.04
APOBP04114 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
APOBP04114 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
APOBP04114 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
APOBP04114 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
APOBP04114 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
APOBP04114 PTP4A1P3-201ENST00000433661 420 ntBASIC2.33□□□□□ -2.04
APOBP04114 SNORD105B-201ENST00000458770 79 ntBASIC2.33□□□□□ -2.04
APOBP04114 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.33□□□□□ -2.04
APOBP04114 AC069306.1-201ENST00000507006 843 ntBASIC2.33□□□□□ -2.04
APOBP04114 RPL12P22-201ENST00000519073 490 ntBASIC2.33□□□□□ -2.04
APOBP04114 AC103843.2-201ENST00000530523 682 ntBASIC2.33□□□□□ -2.04
APOBP04114 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC2.33□□□□□ -2.04
APOBP04114 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC2.33□□□□□ -2.04
APOBP04114 AC006023.1-201ENST00000603944 259 ntBASIC2.33□□□□□ -2.04
APOBP04114 AL355365.1-201ENST00000616480 294 ntBASIC2.33□□□□□ -2.04
APOBP04114 AC007998.5-201ENST00000622938 237 ntBASIC2.33□□□□□ -2.04
APOBP04114 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC2.33□□□□□ -2.04
APOBP04114 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
APOBP04114 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.33□□□□□ -2.04
APOBP04114 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
APOBP04114 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC2.33□□□□□ -2.04
APOBP04114 RPL5P18-201ENST00000406671 891 ntBASIC2.33□□□□□ -2.04
APOBP04114 OR51A6P-201ENST00000418680 1004 ntBASIC2.33□□□□□ -2.04
APOBP04114 OR2AH1P-201ENST00000425717 928 ntBASIC2.33□□□□□ -2.04
APOBP04114 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC2.33□□□□□ -2.04
APOBP04114 IGKV2-38-201ENST00000517443 247 ntBASIC2.33□□□□□ -2.04
APOBP04114 AC090151.1-201ENST00000520784 730 ntBASIC2.33□□□□□ -2.04
APOBP04114 AC100770.1-201ENST00000532310 322 ntBASIC2.33□□□□□ -2.04
APOBP04114 AC097505.1-201ENST00000610199 565 ntBASIC2.33□□□□□ -2.04
APOBP04114 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
APOBP04114 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
APOBP04114 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
APOBP04114 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
APOBP04114 ARF4P3-201ENST00000397387 509 ntBASIC2.32□□□□□ -2.04
APOBP04114 AL080315.1-201ENST00000406055 466 ntBASIC2.32□□□□□ -2.04
APOBP04114 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC2.32□□□□□ -2.04
APOBP04114 VTI1BP4-201ENST00000427516 527 ntBASIC2.32□□□□□ -2.04
APOBP04114 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC2.32□□□□□ -2.04
APOBP04114 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
APOBP04114 AL049844.2-201ENST00000604280 628 ntBASIC2.32□□□□□ -2.04
APOBP04114 MIR8057-201ENST00000620957 69 ntBASIC2.32□□□□□ -2.04
APOBP04114 AC006386.2-201ENST00000624491 75 ntBASIC2.32□□□□□ -2.04
APOBP04114 AC012005.1-201ENST00000624575 75 ntBASIC2.32□□□□□ -2.04
APOBP04114 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
APOBP04114 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
APOBP04114 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
APOBP04114 NCOA4P2-201ENST00000340589 1813 ntBASIC2.32□□□□□ -2.04
APOBP04114 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
APOBP04114 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
APOBP04114 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
APOBP04114 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC2.32□□□□□ -2.04
APOBP04114 ZNF602P-201ENST00000405929 924 ntBASIC2.32□□□□□ -2.04
APOBP04114 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC2.32□□□□□ -2.04
APOBP04114 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC2.32□□□□□ -2.04
APOBP04114 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.32□□□□□ -2.04
APOBP04114 AC096644.3-201ENST00000416788 338 ntBASIC2.32□□□□□ -2.04
APOBP04114 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.32□□□□□ -2.04
APOBP04114 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC2.32□□□□□ -2.04
APOBP04114 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC2.32□□□□□ -2.04
APOBP04114 RPL5P23-201ENST00000496040 868 ntBASIC2.32□□□□□ -2.04
APOBP04114 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC2.32□□□□□ -2.04
APOBP04114 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.32□□□□□ -2.04
APOBP04114 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC2.32□□□□□ -2.04
APOBP04114 AC069240.1-201ENST00000548774 375 ntBASIC2.32□□□□□ -2.04
APOBP04114 AC010503.3-201ENST00000594355 540 ntBASIC2.32□□□□□ -2.04
APOBP04114 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC2.32□□□□□ -2.04
APOBP04114 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC2.32□□□□□ -2.04
APOBP04114 AL034403.1-201ENST00000399414 885 ntBASIC2.32□□□□□ -2.04
APOBP04114 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC2.32□□□□□ -2.04
APOBP04114 RN7SKP18-201ENST00000516005 275 ntBASIC2.32□□□□□ -2.04
APOBP04114 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.32□□□□□ -2.04
APOBP04114 AC008966.2-201ENST00000606157 453 ntBASIC2.32□□□□□ -2.04
APOBP04114 AL391497.1-201ENST00000608671 547 ntBASIC2.32□□□□□ -2.04
APOBP04114 AL359757.2-201ENST00000624309 274 ntBASIC2.32□□□□□ -2.04
APOBP04114 AP001153.1-201ENST00000641024 338 ntBASIC2.32□□□□□ -2.04
APOBP04114 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
APOBP04114 AC024341.1-201ENST00000526444 1552 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms