Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 HLA-N-201ENST00000437516 135 ntBASIC3.67□□□□□ -1.82
SNRNP200O75643 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
SNRNP200O75643 AL645931.1-201ENST00000439737 410 ntBASIC3.67□□□□□ -1.82
SNRNP200O75643 AC069285.2-201ENST00000440210 275 ntBASIC3.67□□□□□ -1.82
SNRNP200O75643 NOTCH2P1-201ENST00000443481 624 ntBASIC3.67□□□□□ -1.82
SNRNP200O75643 YWHAQP9-201ENST00000445891 512 ntBASIC3.67□□□□□ -1.82
SNRNP200O75643 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.67□□□□□ -1.82
SNRNP200O75643 SEPT14P1-201ENST00000458703 648 ntBASIC3.67□□□□□ -1.82
SNRNP200O75643 RNA5SP208-201ENST00000516156 78 ntBASIC3.67□□□□□ -1.82
SNRNP200O75643 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.67□□□□□ -1.82
SNRNP200O75643 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SNRNP200O75643 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.67□□□□□ -1.82
SNRNP200O75643 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.67□□□□□ -1.82
SNRNP200O75643 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SNRNP200O75643 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SNRNP200O75643 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNRNP200O75643 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNRNP200O75643 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNRNP200O75643 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.66□□□□□ -1.82
SNRNP200O75643 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNRNP200O75643 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNRNP200O75643 RNA5SP51-201ENST00000364750 119 ntBASIC3.66□□□□□ -1.82
SNRNP200O75643 Z97055.1-201ENST00000419730 712 ntBASIC3.66□□□□□ -1.82
SNRNP200O75643 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.66□□□□□ -1.82
SNRNP200O75643 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.66□□□□□ -1.82
SNRNP200O75643 AC239367.2-201ENST00000447309 705 ntBASIC3.66□□□□□ -1.82
SNRNP200O75643 RPS6P2-201ENST00000454208 705 ntBASIC3.66□□□□□ -1.82
SNRNP200O75643 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.66□□□□□ -1.82
SNRNP200O75643 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.66□□□□□ -1.82
SNRNP200O75643 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.66□□□□□ -1.82
SNRNP200O75643 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.66□□□□□ -1.82
SNRNP200O75643 AC020978.9-201ENST00000624380 1141 ntBASIC3.66□□□□□ -1.82
SNRNP200O75643 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.66□□□□□ -1.82
SNRNP200O75643 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SNRNP200O75643 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNRNP200O75643 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SNRNP200O75643 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNRNP200O75643 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
SNRNP200O75643 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
SNRNP200O75643 SNORD74.4-201ENST00000364129 80 ntBASIC3.65□□□□□ -1.82
SNRNP200O75643 AL050305.1-201ENST00000399993 1230 ntBASIC3.65□□□□□ -1.82
SNRNP200O75643 SNORA3.3-201ENST00000408712 125 ntBASIC3.65□□□□□ -1.82
SNRNP200O75643 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.65□□□□□ -1.82
SNRNP200O75643 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.65□□□□□ -1.82
SNRNP200O75643 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.65□□□□□ -1.82
SNRNP200O75643 KCTD9P3-201ENST00000434597 1169 ntBASIC3.65□□□□□ -1.82
SNRNP200O75643 AL353748.1-201ENST00000440753 474 ntBASIC3.65□□□□□ -1.82
SNRNP200O75643 AL589765.3-201ENST00000446084 462 ntBASIC3.65□□□□□ -1.82
SNRNP200O75643 CYCSP53-201ENST00000455540 265 ntBASIC3.65□□□□□ -1.82
SNRNP200O75643 RPS26P15-201ENST00000488067 348 ntBASIC3.65□□□□□ -1.82
SNRNP200O75643 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.65□□□□□ -1.82
SNRNP200O75643 MTND4LP31-201ENST00000514859 294 ntBASIC3.65□□□□□ -1.82
SNRNP200O75643 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.65□□□□□ -1.82
SNRNP200O75643 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SNRNP200O75643 AC124856.1-201ENST00000600819 896 ntBASIC3.65□□□□□ -1.82
SNRNP200O75643 AL390816.3-201ENST00000604527 1066 ntBASIC3.65□□□□□ -1.82
SNRNP200O75643 AC112200.1-201ENST00000625015 234 ntBASIC3.65□□□□□ -1.82
SNRNP200O75643 AL606537.1-201ENST00000607258 2011 ntBASIC3.65□□□□□ -1.82
SNRNP200O75643 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.65□□□□□ -1.82
SNRNP200O75643 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SNRNP200O75643 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SNRNP200O75643 AC018529.3-201ENST00000624212 2254 ntBASIC3.65□□□□□ -1.82
SNRNP200O75643 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.65□□□□□ -1.83
SNRNP200O75643 IPO8P1-201ENST00000455509 3109 ntBASIC3.65□□□□□ -1.83
SNRNP200O75643 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
SNRNP200O75643 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.65□□□□□ -1.83
SNRNP200O75643 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
SNRNP200O75643 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SNRNP200O75643 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SNRNP200O75643 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
SNRNP200O75643 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.65□□□□□ -1.83
SNRNP200O75643 AL389915.1-201ENST00000422463 466 ntBASIC3.65□□□□□ -1.83
SNRNP200O75643 RPL7P2-201ENST00000427639 268 ntBASIC3.65□□□□□ -1.83
SNRNP200O75643 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SNRNP200O75643 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.65□□□□□ -1.83
SNRNP200O75643 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.65□□□□□ -1.83
SNRNP200O75643 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.65□□□□□ -1.83
SNRNP200O75643 AL133457.1-201ENST00000564251 987 ntBASIC3.65□□□□□ -1.83
SNRNP200O75643 MIR5685-201ENST00000579080 79 ntBASIC3.65□□□□□ -1.83
SNRNP200O75643 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.65□□□□□ -1.83
SNRNP200O75643 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
SNRNP200O75643 AL133247.2-201ENST00000603236 482 ntBASIC3.65□□□□□ -1.83
SNRNP200O75643 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.65□□□□□ -1.83
SNRNP200O75643 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.65□□□□□ -1.83
SNRNP200O75643 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.65□□□□□ -1.83
SNRNP200O75643 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SNRNP200O75643 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
SNRNP200O75643 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SNRNP200O75643 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.64□□□□□ -1.83
SNRNP200O75643 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SNRNP200O75643 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.64□□□□□ -1.83
SNRNP200O75643 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SNRNP200O75643 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SNRNP200O75643 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SNRNP200O75643 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SNRNP200O75643 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.64□□□□□ -1.83
SNRNP200O75643 SNORA11-201ENST00000408789 128 ntBASIC3.64□□□□□ -1.83
SNRNP200O75643 SNORA79B-201ENST00000410557 148 ntBASIC3.64□□□□□ -1.83
SNRNP200O75643 RPL7AP73-201ENST00000413490 353 ntBASIC3.64□□□□□ -1.83
SNRNP200O75643 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms