Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC087808.1-201ENST00000520501 361 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS4BO75351 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
VPS4BO75351 HIGD1AP17-201ENST00000554576 276 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS4BO75351 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS4BO75351 MIR4436B2-201ENST00000581415 91 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 MIR4436B1-201ENST00000583272 91 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 AC012616.1-201ENST00000600294 197 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.19□□□□□ -1.58
VPS4BO75351 AL163642.2-201ENST00000604722 1019 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 HULC.1-201ENST00000612720 240 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 AC090116.1-201ENST00000615679 446 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 AC006840.1-201ENST00000623069 542 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 AC132068.1-201ENST00000623805 459 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS4BO75351 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS4BO75351 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS4BO75351 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.19□□□□□ -1.58
VPS4BO75351 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
VPS4BO75351 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS4BO75351 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS4BO75351 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS4BO75351 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
VPS4BO75351 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS4BO75351 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 AL606537.1-201ENST00000607258 2011 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS4BO75351 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS4BO75351 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS4BO75351 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS4BO75351 Y_RNA.505-201ENST00000384489 102 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 RNU6-225P-201ENST00000384613 103 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 AC007738.1-201ENST00000413892 348 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 MRPS36P1-201ENST00000421291 307 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS4BO75351 DPRXP1-201ENST00000426312 460 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS4BO75351 Z93242.1-201ENST00000427102 353 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 RPS24P8-201ENST00000431490 402 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 AP000936.3-201ENST00000438127 255 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS4BO75351 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS4BO75351 AC009961.3-201ENST00000449832 765 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS4BO75351 PNPLA4P1-201ENST00000458328 305 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 ACTG1P13-201ENST00000486987 1043 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 AC069304.1-201ENST00000491593 704 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 CEACAMP10-202ENST00000495431 496 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.18□□□□□ -1.58
VPS4BO75351 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS4BO75351 DYNLL1P6-201ENST00000503440 264 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 HMGB1P44-201ENST00000508597 572 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 MTCYBP37-201ENST00000510642 1133 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 AC010587.2-201ENST00000511727 448 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS4BO75351 AC109445.1-201ENST00000512356 383 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 HNRNPKP5-201ENST00000515300 253 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS4BO75351 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS4BO75351 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS4BO75351 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS4BO75351 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS4BO75351 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS4BO75351 AC022884.2-201ENST00000578535 580 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS4BO75351 AC090312.2-201ENST00000582687 378 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS4BO75351 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS4BO75351 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS4BO75351 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS4BO75351 AL031985.2-201ENST00000600955 480 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 AC009220.3-201ENST00000604318 586 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 AP004247.3-201ENST00000608682 624 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 AL353726.1-201ENST00000614041 1000 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS4BO75351 AC023509.5-201ENST00000617434 807 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 AL731566.2-201ENST00000618971 317 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS4BO75351 Z69908.1-201ENST00000622603 247 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 AC016717.3-201ENST00000624730 554 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS4BO75351 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
VPS4BO75351 FP325313.1-201ENST00000638228 703 ntBASIC5.18□□□□□ -1.58
VPS4BO75351 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS4BO75351 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS4BO75351 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS4BO75351 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS4BO75351 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.18□□□□□ -1.58
VPS4BO75351 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
VPS4BO75351 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS4BO75351 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS4BO75351 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
VPS4BO75351 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS4BO75351 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS4BO75351 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS4BO75351 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS4BO75351 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS4BO75351 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS4BO75351 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms