Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.11□□□□□ -1.91
SSSCA1O60232 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SSSCA1O60232 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SSSCA1O60232 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SSSCA1O60232 AL132640.2-201ENST00000559968 1698 ntBASIC3.11□□□□□ -1.91
SSSCA1O60232 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.11□□□□□ -1.91
SSSCA1O60232 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
SSSCA1O60232 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SSSCA1O60232 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.1□□□□□ -1.91
SSSCA1O60232 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.1□□□□□ -1.91
SSSCA1O60232 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SSSCA1O60232 PWAR6-201ENST00000552334 4618 ntBASIC3.1□□□□□ -1.91
SSSCA1O60232 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SSSCA1O60232 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.1□□□□□ -1.91
SSSCA1O60232 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SSSCA1O60232 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SSSCA1O60232 SNORA11.3-201ENST00000408471 128 ntBASIC3.1□□□□□ -1.91
SSSCA1O60232 SNORA57.3-201ENST00000411095 141 ntBASIC3.1□□□□□ -1.91
SSSCA1O60232 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.1□□□□□ -1.91
SSSCA1O60232 AC019050.1-201ENST00000418508 492 ntBASIC3.1□□□□□ -1.91
SSSCA1O60232 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.1□□□□□ -1.91
SSSCA1O60232 AP000936.3-201ENST00000438127 255 ntBASIC3.1□□□□□ -1.91
SSSCA1O60232 FHP1-201ENST00000442741 703 ntBASIC3.1□□□□□ -1.91
SSSCA1O60232 RN7SL329P-201ENST00000467740 299 ntBASIC3.1□□□□□ -1.91
SSSCA1O60232 AK3P4-201ENST00000504283 583 ntBASIC3.1□□□□□ -1.91
SSSCA1O60232 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.1□□□□□ -1.91
SSSCA1O60232 RNA5SP208-201ENST00000516156 78 ntBASIC3.1□□□□□ -1.91
SSSCA1O60232 RN7SKP92-201ENST00000517266 244 ntBASIC3.1□□□□□ -1.91
SSSCA1O60232 AC087369.1-201ENST00000520775 996 ntBASIC3.1□□□□□ -1.91
SSSCA1O60232 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.1□□□□□ -1.91
SSSCA1O60232 AC008489.1-201ENST00000524271 483 ntBASIC3.1□□□□□ -1.91
SSSCA1O60232 OR5AP1P-201ENST00000529730 940 ntBASIC3.1□□□□□ -1.91
SSSCA1O60232 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.1□□□□□ -1.91
SSSCA1O60232 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.1□□□□□ -1.91
SSSCA1O60232 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.1□□□□□ -1.91
SSSCA1O60232 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.1□□□□□ -1.91
SSSCA1O60232 SNORA11.6-201ENST00000619030 128 ntBASIC3.1□□□□□ -1.91
SSSCA1O60232 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.1□□□□□ -1.91
SSSCA1O60232 OR8A1-204ENST00000642111 1145 ntBASIC3.1□□□□□ -1.91
SSSCA1O60232 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
SSSCA1O60232 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SSSCA1O60232 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SSSCA1O60232 NR1H5P-201ENST00000452683 1377 ntBASIC3.1□□□□□ -1.91
SSSCA1O60232 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SSSCA1O60232 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.1□□□□□ -1.91
SSSCA1O60232 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.1□□□□□ -1.91
SSSCA1O60232 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SSSCA1O60232 CYP1D1P-201ENST00000416662 1433 ntBASIC3.1□□□□□ -1.91
SSSCA1O60232 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.1□□□□□ -1.91
SSSCA1O60232 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SSSCA1O60232 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.09□□□□□ -1.91
SSSCA1O60232 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SSSCA1O60232 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SSSCA1O60232 PRO1804-201ENST00000623780 2050 ntBASIC3.09□□□□□ -1.91
SSSCA1O60232 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
SSSCA1O60232 RNA5SP443-201ENST00000363083 132 ntBASIC3.09□□□□□ -1.91
SSSCA1O60232 RNU6-283P-201ENST00000364788 107 ntBASIC3.09□□□□□ -1.91
SSSCA1O60232 MIR184-201ENST00000384962 84 ntBASIC3.09□□□□□ -1.91
SSSCA1O60232 RPS3AP23-201ENST00000401762 784 ntBASIC3.09□□□□□ -1.91
SSSCA1O60232 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SSSCA1O60232 BX510359.3-201ENST00000422168 306 ntBASIC3.09□□□□□ -1.91
SSSCA1O60232 HIGD1AP12-201ENST00000427832 281 ntBASIC3.09□□□□□ -1.91
SSSCA1O60232 USP9YP9-201ENST00000429406 715 ntBASIC3.09□□□□□ -1.91
SSSCA1O60232 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.09□□□□□ -1.91
SSSCA1O60232 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SSSCA1O60232 ACTR3P2-201ENST00000439585 1257 ntBASIC3.09□□□□□ -1.91
SSSCA1O60232 AL138878.2-201ENST00000440581 1241 ntBASIC3.09□□□□□ -1.91
SSSCA1O60232 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SSSCA1O60232 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.09□□□□□ -1.91
SSSCA1O60232 AL133244.1-201ENST00000456007 258 ntBASIC3.09□□□□□ -1.91
SSSCA1O60232 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
SSSCA1O60232 RPL21P11-201ENST00000461458 483 ntBASIC3.09□□□□□ -1.91
SSSCA1O60232 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC3.09□□□□□ -1.91
SSSCA1O60232 AC108475.1-201ENST00000507880 950 ntBASIC3.09□□□□□ -1.91
SSSCA1O60232 AC106806.2-201ENST00000509365 500 ntBASIC3.09□□□□□ -1.91
SSSCA1O60232 USP9YP5-201ENST00000511770 630 ntBASIC3.09□□□□□ -1.91
SSSCA1O60232 FTH1P9-201ENST00000513251 355 ntBASIC3.09□□□□□ -1.91
SSSCA1O60232 SNORA70.14-201ENST00000516205 110 ntBASIC3.09□□□□□ -1.91
SSSCA1O60232 RNA5SP179-201ENST00000517284 121 ntBASIC3.09□□□□□ -1.91
SSSCA1O60232 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.09□□□□□ -1.91
SSSCA1O60232 DUX4L52-201ENST00000549363 777 ntBASIC3.09□□□□□ -1.91
SSSCA1O60232 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.09□□□□□ -1.91
SSSCA1O60232 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.09□□□□□ -1.91
SSSCA1O60232 MIR4310-201ENST00000582950 57 ntBASIC3.09□□□□□ -1.91
SSSCA1O60232 KLKP1-201ENST00000595979 403 ntBASIC3.09□□□□□ -1.91
SSSCA1O60232 AC091167.4-201ENST00000605079 184 ntBASIC3.09□□□□□ -1.91
SSSCA1O60232 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.09□□□□□ -1.91
SSSCA1O60232 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.09□□□□□ -1.91
SSSCA1O60232 AL158062.1-201ENST00000619632 745 ntBASIC3.09□□□□□ -1.91
SSSCA1O60232 AC073073.2-201ENST00000609827 2578 ntBASIC3.09□□□□□ -1.91
SSSCA1O60232 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SSSCA1O60232 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SSSCA1O60232 RARSP1-201ENST00000542842 1418 ntBASIC3.09□□□□□ -1.92
SSSCA1O60232 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SSSCA1O60232 EXOC5P1-201ENST00000510543 1969 ntBASIC3.09□□□□□ -1.92
SSSCA1O60232 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SSSCA1O60232 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SSSCA1O60232 AC053481.2-202ENST00000582394 1500 ntBASIC3.09□□□□□ -1.92
SSSCA1O60232 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC3.08□□□□□ -1.92
SSSCA1O60232 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms