Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSX4O60224 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.38□□□□□ -1.71
SSX4O60224 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.38□□□□□ -1.71
SSX4O60224 NIFKP8-201ENST00000560500 874 ntBASIC4.38□□□□□ -1.71
SSX4O60224 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.38□□□□□ -1.71
SSX4O60224 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.38□□□□□ -1.71
SSX4O60224 AC116553.2-201ENST00000564203 463 ntBASIC4.38□□□□□ -1.71
SSX4O60224 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.38□□□□□ -1.71
SSX4O60224 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SSX4O60224 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.38□□□□□ -1.71
SSX4O60224 MIR4691-201ENST00000583764 85 ntBASIC4.38□□□□□ -1.71
SSX4O60224 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.38□□□□□ -1.71
SSX4O60224 AL365400.2-201ENST00000605604 902 ntBASIC4.38□□□□□ -1.71
SSX4O60224 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.38□□□□□ -1.71
SSX4O60224 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSX4O60224 RN7SL722P-201ENST00000617780 284 ntBASIC4.38□□□□□ -1.71
SSX4O60224 RN7SL565P-201ENST00000618246 284 ntBASIC4.38□□□□□ -1.71
SSX4O60224 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSX4O60224 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSX4O60224 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SSX4O60224 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.38□□□□□ -1.71
SSX4O60224 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SSX4O60224 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.38□□□□□ -1.71
SSX4O60224 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SSX4O60224 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.38□□□□□ -1.71
SSX4O60224 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.38□□□□□ -1.71
SSX4O60224 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSX4O60224 PHKBP1-201ENST00000450951 1951 ntBASIC4.38□□□□□ -1.71
SSX4O60224 ASNSP1-204ENST00000641977 1664 ntBASIC4.38□□□□□ -1.71
SSX4O60224 USP9YP4-201ENST00000424401 1745 ntBASIC4.38□□□□□ -1.71
SSX4O60224 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSX4O60224 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SSX4O60224 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSX4O60224 AC012618.3-205ENST00000637896 1496 ntBASIC4.37□□□□□ -1.71
SSX4O60224 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSX4O60224 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
SSX4O60224 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SSX4O60224 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.37□□□□□ -1.71
SSX4O60224 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSX4O60224 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SSX4O60224 ANKRD36P1-201ENST00000344424 659 ntBASIC4.37□□□□□ -1.71
SSX4O60224 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.37□□□□□ -1.71
SSX4O60224 NUDT19P3-201ENST00000404698 555 ntBASIC4.37□□□□□ -1.71
SSX4O60224 RNU2-65P-201ENST00000410162 185 ntBASIC4.37□□□□□ -1.71
SSX4O60224 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SSX4O60224 RPS7P9-201ENST00000414704 586 ntBASIC4.37□□□□□ -1.71
SSX4O60224 CHEK2P3-201ENST00000416118 248 ntBASIC4.37□□□□□ -1.71
SSX4O60224 MTND4P3-201ENST00000417829 541 ntBASIC4.37□□□□□ -1.71
SSX4O60224 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.37□□□□□ -1.71
SSX4O60224 OR2AM1P-201ENST00000422137 422 ntBASIC4.37□□□□□ -1.71
SSX4O60224 RPL7P4-203ENST00000430239 730 ntBASIC4.37□□□□□ -1.71
SSX4O60224 RPL21P110-201ENST00000433345 446 ntBASIC4.37□□□□□ -1.71
SSX4O60224 AC008072.1-201ENST00000434254 824 ntBASIC4.37□□□□□ -1.71
SSX4O60224 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.37□□□□□ -1.71
SSX4O60224 ARL4AP3-201ENST00000441452 574 ntBASIC4.37□□□□□ -1.71
SSX4O60224 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.37□□□□□ -1.71
SSX4O60224 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.37□□□□□ -1.71
SSX4O60224 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.37□□□□□ -1.71
SSX4O60224 TPT1P13-201ENST00000449760 499 ntBASIC4.37□□□□□ -1.71
SSX4O60224 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.37□□□□□ -1.71
SSX4O60224 AC140172.1-201ENST00000502928 141 ntBASIC4.37□□□□□ -1.71
SSX4O60224 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.37□□□□□ -1.71
SSX4O60224 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.37□□□□□ -1.71
SSX4O60224 LRRC6P1-201ENST00000532188 885 ntBASIC4.37□□□□□ -1.71
SSX4O60224 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.37□□□□□ -1.71
SSX4O60224 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
SSX4O60224 MTCYBP23-201ENST00000558717 1102 ntBASIC4.37□□□□□ -1.71
SSX4O60224 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.37□□□□□ -1.71
SSX4O60224 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.37□□□□□ -1.71
SSX4O60224 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.37□□□□□ -1.71
SSX4O60224 MTND1P8-201ENST00000571424 950 ntBASIC4.37□□□□□ -1.71
SSX4O60224 MIR4330-201ENST00000579077 105 ntBASIC4.37□□□□□ -1.71
SSX4O60224 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.37□□□□□ -1.71
SSX4O60224 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.37□□□□□ -1.71
SSX4O60224 RPAP2P1-201ENST00000603626 1168 ntBASIC4.37□□□□□ -1.71
SSX4O60224 AL031320.1-201ENST00000604177 357 ntBASIC4.37□□□□□ -1.71
SSX4O60224 AC024060.1-201ENST00000607052 494 ntBASIC4.37□□□□□ -1.71
SSX4O60224 AC034229.4-201ENST00000607861 441 ntBASIC4.37□□□□□ -1.71
SSX4O60224 AL157392.4-201ENST00000609756 345 ntBASIC4.37□□□□□ -1.71
SSX4O60224 AC100847.1-201ENST00000611316 481 ntBASIC4.37□□□□□ -1.71
SSX4O60224 AC234782.5-201ENST00000617723 324 ntBASIC4.37□□□□□ -1.71
SSX4O60224 VN1R7P-201ENST00000619242 903 ntBASIC4.37□□□□□ -1.71
SSX4O60224 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.37□□□□□ -1.71
SSX4O60224 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SSX4O60224 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.37□□□□□ -1.71
SSX4O60224 MAPK10-263ENST00000641052 4307 ntBASIC4.37□□□□□ -1.71
SSX4O60224 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSX4O60224 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.36□□□□□ -1.71
SSX4O60224 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SSX4O60224 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SSX4O60224 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.36□□□□□ -1.71
SSX4O60224 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.36□□□□□ -1.71
SSX4O60224 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
SSX4O60224 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.36□□□□□ -1.71
SSX4O60224 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SSX4O60224 RN7SKP149-201ENST00000363008 344 ntBASIC4.36□□□□□ -1.71
SSX4O60224 Y_RNA.578-201ENST00000390903 88 ntBASIC4.36□□□□□ -1.71
SSX4O60224 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSX4O60224 HDGFP1-201ENST00000405943 252 ntBASIC4.36□□□□□ -1.71
SSX4O60224 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms