Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PHGDHO43175 CASC19-248ENST00000641674 1356 ntBASIC5.15□□□□□ -1.59
PHGDHO43175 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PHGDHO43175 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.15□□□□□ -1.59
PHGDHO43175 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PHGDHO43175 AC104260.2-201ENST00000623551 3497 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 AC100778.3-201ENST00000580060 1750 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
PHGDHO43175 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PHGDHO43175 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.14□□□□□ -1.59
PHGDHO43175 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PHGDHO43175 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
PHGDHO43175 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PHGDHO43175 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PHGDHO43175 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.14□□□□□ -1.59
PHGDHO43175 RNU6-931P-201ENST00000363850 107 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 RNA5SP90-201ENST00000364801 99 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PHGDHO43175 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.14□□□□□ -1.59
PHGDHO43175 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PHGDHO43175 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PHGDHO43175 RNU6-444P-201ENST00000383988 108 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 RNU6-1200P-201ENST00000384162 107 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 SNORD116-1-201ENST00000384335 95 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 AL031985.1-201ENST00000392713 418 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 AL035079.1-201ENST00000405210 287 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 MTCO3P31-201ENST00000405526 789 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 U3.32-201ENST00000408116 212 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 P2RY10P2-201ENST00000416730 913 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 AC092634.6-201ENST00000418558 192 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 AL133325.1-201ENST00000421090 382 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 AC009237.2-201ENST00000421358 284 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 AL022400.1-201ENST00000423946 935 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 RPP40P1-201ENST00000426762 456 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 AL390023.1-201ENST00000428836 262 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 AC008072.1-201ENST00000434254 824 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 MTND4P32-201ENST00000437189 1237 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 CYCSP12-201ENST00000437729 300 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.14□□□□□ -1.59
PHGDHO43175 AL606662.1-201ENST00000445763 553 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.14□□□□□ -1.59
PHGDHO43175 EEF1A1P1-201ENST00000447052 739 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 RSL24D1P3-201ENST00000449255 495 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 AL591363.1-201ENST00000450091 483 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 RN7SL447P-201ENST00000494711 245 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 AC082651.2-201ENST00000496833 166 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.14□□□□□ -1.59
PHGDHO43175 AC111000.2-201ENST00000507775 550 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.14□□□□□ -1.59
PHGDHO43175 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.14□□□□□ -1.59
PHGDHO43175 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.14□□□□□ -1.59
PHGDHO43175 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.14□□□□□ -1.59
PHGDHO43175 HNRNPKP5-201ENST00000515300 253 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 RNU6-759P-201ENST00000516740 103 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 RNU6-1261P-201ENST00000517194 104 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.14□□□□□ -1.59
PHGDHO43175 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.14□□□□□ -1.59
PHGDHO43175 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.14□□□□□ -1.59
PHGDHO43175 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.14□□□□□ -1.59
PHGDHO43175 TRAV15-201ENST00000556680 249 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.14□□□□□ -1.59
PHGDHO43175 AC135628.1-201ENST00000568867 534 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.14□□□□□ -1.59
PHGDHO43175 AC040904.1-201ENST00000590850 223 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.14□□□□□ -1.59
PHGDHO43175 AC110760.3-201ENST00000598794 467 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 DUXAP11-201ENST00000603858 526 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.14□□□□□ -1.59
PHGDHO43175 AL354976.1-201ENST00000613843 387 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.14□□□□□ -1.59
PHGDHO43175 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PHGDHO43175 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
PHGDHO43175 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.14□□□□□ -1.59
PHGDHO43175 MTND5P31-201ENST00000419366 1374 ntBASIC5.14□□□□□ -1.59
PHGDHO43175 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PHGDHO43175 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PHGDHO43175 CDR1-202ENST00000625883 1485 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PHGDHO43175 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.13□□□□□ -1.59
PHGDHO43175 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PHGDHO43175 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PHGDHO43175 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
PHGDHO43175 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PHGDHO43175 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PHGDHO43175 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.13□□□□□ -1.59
PHGDHO43175 RNA5SP435-201ENST00000364044 108 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PHGDHO43175 OR8V1P-201ENST00000395193 873 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.13□□□□□ -1.59
PHGDHO43175 AL121978.1-201ENST00000402778 359 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 HNRNPDP2-201ENST00000406475 478 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.13□□□□□ -1.59
PHGDHO43175 TPT1P2-201ENST00000413105 503 ntBASIC5.13□□□□□ -1.59
PHGDHO43175 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.13□□□□□ -1.59
PHGDHO43175 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.13□□□□□ -1.59
PHGDHO43175 RPS25P9-201ENST00000435591 252 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms