Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.16□□□□□ -1.74
LSM1O15116 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
LSM1O15116 TNPO1P3-201ENST00000436471 2662 ntBASIC4.16□□□□□ -1.74
LSM1O15116 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.16□□□□□ -1.74
LSM1O15116 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LSM1O15116 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LSM1O15116 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.15□□□□□ -1.74
LSM1O15116 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.15□□□□□ -1.74
LSM1O15116 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LSM1O15116 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.15□□□□□ -1.74
LSM1O15116 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LSM1O15116 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.15□□□□□ -1.75
LSM1O15116 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.15□□□□□ -1.75
LSM1O15116 RNU7-170P-201ENST00000459303 61 ntBASIC4.15□□□□□ -1.75
LSM1O15116 RPL7P22-201ENST00000466005 733 ntBASIC4.15□□□□□ -1.75
LSM1O15116 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.15□□□□□ -1.75
LSM1O15116 AC104164.2-201ENST00000496953 495 ntBASIC4.15□□□□□ -1.75
LSM1O15116 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.15□□□□□ -1.75
LSM1O15116 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.15□□□□□ -1.75
LSM1O15116 NDUFA5P12-201ENST00000503796 343 ntBASIC4.15□□□□□ -1.75
LSM1O15116 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.15□□□□□ -1.75
LSM1O15116 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.15□□□□□ -1.75
LSM1O15116 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.15□□□□□ -1.75
LSM1O15116 PARP4P3-201ENST00000510265 317 ntBASIC4.15□□□□□ -1.75
LSM1O15116 NDUFB4P9-201ENST00000511646 388 ntBASIC4.15□□□□□ -1.75
LSM1O15116 AC108120.2-201ENST00000512973 294 ntBASIC4.15□□□□□ -1.75
LSM1O15116 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.15□□□□□ -1.75
LSM1O15116 HIGD1AP18-201ENST00000520730 278 ntBASIC4.15□□□□□ -1.75
LSM1O15116 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.15□□□□□ -1.75
LSM1O15116 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.15□□□□□ -1.75
LSM1O15116 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
LSM1O15116 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
LSM1O15116 MIR4270-201ENST00000581799 70 ntBASIC4.15□□□□□ -1.75
LSM1O15116 MIR4512-201ENST00000583257 77 ntBASIC4.15□□□□□ -1.75
LSM1O15116 AL021997.2-201ENST00000615674 271 ntBASIC4.15□□□□□ -1.75
LSM1O15116 AC091953.3-201ENST00000623220 236 ntBASIC4.15□□□□□ -1.75
LSM1O15116 AC007342.8-201ENST00000623278 678 ntBASIC4.15□□□□□ -1.75
LSM1O15116 AC138907.10-201ENST00000623708 983 ntBASIC4.15□□□□□ -1.75
LSM1O15116 AP003497.2-201ENST00000624220 967 ntBASIC4.15□□□□□ -1.75
LSM1O15116 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.15□□□□□ -1.75
LSM1O15116 AP003072.4-201ENST00000624580 310 ntBASIC4.15□□□□□ -1.75
LSM1O15116 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LSM1O15116 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
LSM1O15116 CCT8P1-201ENST00000413611 1657 ntBASIC4.15□□□□□ -1.75
LSM1O15116 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.15□□□□□ -1.75
LSM1O15116 AC096656.1-201ENST00000623826 1364 ntBASIC4.14□□□□□ -1.75
LSM1O15116 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LSM1O15116 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
LSM1O15116 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.14□□□□□ -1.75
LSM1O15116 AL118496.1-201ENST00000440201 1812 ntBASIC4.14□□□□□ -1.75
LSM1O15116 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.14□□□□□ -1.75
LSM1O15116 AL139811.1-201ENST00000424779 2299 ntBASIC4.14□□□□□ -1.75
LSM1O15116 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.14□□□□□ -1.75
LSM1O15116 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LSM1O15116 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LSM1O15116 RNA5SP322-201ENST00000363617 119 ntBASIC4.14□□□□□ -1.75
LSM1O15116 RNU6-244P-201ENST00000391028 104 ntBASIC4.14□□□□□ -1.75
LSM1O15116 AL161631.1-201ENST00000417933 486 ntBASIC4.14□□□□□ -1.75
LSM1O15116 AL590762.4-201ENST00000425885 253 ntBASIC4.14□□□□□ -1.75
LSM1O15116 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.14□□□□□ -1.75
LSM1O15116 CEACAMP1-201ENST00000434624 1035 ntBASIC4.14□□□□□ -1.75
LSM1O15116 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.14□□□□□ -1.75
LSM1O15116 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
LSM1O15116 AL627224.1-201ENST00000448334 444 ntBASIC4.14□□□□□ -1.75
LSM1O15116 RNU7-27P-201ENST00000459281 62 ntBASIC4.14□□□□□ -1.75
LSM1O15116 OR52A4P-201ENST00000472867 958 ntBASIC4.14□□□□□ -1.75
LSM1O15116 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.14□□□□□ -1.75
LSM1O15116 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.14□□□□□ -1.75
LSM1O15116 RNU6-1004P-201ENST00000516584 111 ntBASIC4.14□□□□□ -1.75
LSM1O15116 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.14□□□□□ -1.75
LSM1O15116 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.14□□□□□ -1.75
LSM1O15116 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.14□□□□□ -1.75
LSM1O15116 TRAV11-201ENST00000539512 339 ntBASIC4.14□□□□□ -1.75
LSM1O15116 AC006064.5-201ENST00000541782 248 ntBASIC4.14□□□□□ -1.75
LSM1O15116 AL109766.1-201ENST00000555080 552 ntBASIC4.14□□□□□ -1.75
LSM1O15116 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.14□□□□□ -1.75
LSM1O15116 AC009268.1-201ENST00000561352 1203 ntBASIC4.14□□□□□ -1.75
LSM1O15116 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.14□□□□□ -1.75
LSM1O15116 AC084783.1-201ENST00000565846 910 ntBASIC4.14□□□□□ -1.75
LSM1O15116 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.14□□□□□ -1.75
LSM1O15116 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.14□□□□□ -1.75
LSM1O15116 AL034351.1-201ENST00000605288 668 ntBASIC4.14□□□□□ -1.75
LSM1O15116 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
LSM1O15116 RAD17P1-201ENST00000418130 2042 ntBASIC4.14□□□□□ -1.75
LSM1O15116 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LSM1O15116 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LSM1O15116 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LSM1O15116 AC090229.1-201ENST00000590983 1609 ntBASIC4.13□□□□□ -1.75
LSM1O15116 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
LSM1O15116 DHX40P1-201ENST00000588725 1412 ntBASIC4.13□□□□□ -1.75
LSM1O15116 AL359715.4-201ENST00000606629 1436 ntBASIC4.13□□□□□ -1.75
LSM1O15116 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.13□□□□□ -1.75
LSM1O15116 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
LSM1O15116 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.13□□□□□ -1.75
LSM1O15116 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.13□□□□□ -1.75
LSM1O15116 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LSM1O15116 OR4K15-201ENST00000305051 1216 ntBASIC4.13□□□□□ -1.75
LSM1O15116 RNU6-819P-201ENST00000364116 107 ntBASIC4.13□□□□□ -1.75
LSM1O15116 MIR550A3-201ENST00000390735 95 ntBASIC4.13□□□□□ -1.75
LSM1O15116 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms